Comamonas antarctica: HUK68_10860
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Entry
HUK68_10860 CDS
T07217
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aant
Comamonas antarctica
Pathway
aant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUK68_10860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aant03019
]
HUK68_10860
03400 DNA repair and recombination proteins [BR:
aant03400
]
HUK68_10860
Enzymes [BR:
aant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUK68_10860
Messenger RNA biogenesis [BR:
aant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUK68_10860
DNA repair and recombination proteins [BR:
aant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HUK68_10860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
AAA_30
AAA_22
GFA
Motif
Other DBs
NCBI-ProteinID:
QKV53352
UniProt:
A0A6N1X5M2
LinkDB
All DBs
Position
2331552..2333279
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AA seq
575 aa
AA seq
DB search
MSTAPRATPARTRRTANPIDTTLRKVFGLKRLRPGQLEVIERVLQGTNTLAVMPTGAGKS
LCYQLPALLLPGTTVVVSPLVALMKDQCDALRALGVAAVQINSAIGSEELAAAREAVENG
SARIVLTTPEQIADPALTTALSRHPVSLLVVDEAHCISEWGHDFRPAFLEIAPAVRALGR
PAVLALTATAKPTVMSEIIALLGIAAKDVVQAGAYRPNLQFAVEPLARAADRLPRALALV
AGYAGSGIVYTATIKCAEELHAKLAAEGESVGLYHGRLNAGERAQAQDDFMEGRVRVMVA
TNAFGLGIDKPDIRFVLHYQMPASVDAYYQEAGRAGRDGENATCTLLYVPQDRALQSFFL
SGRYPSLDDLQAIMALLHQPAPEGSWSADAIVEAAERPRAKVLVALSLLRSHKAVRRTRA
GRFHVVQDLDAAALEALLTGYRTRREQDGATLEAMVAYAQGGRCRWQAVLAALGEAPSFD
TCGHCDNCQRLAALSRLAPAAVVPPIEIRPAAPAKPRFAGGDTVRAKRYGAGQVVEADQN
SVTVEFPDGVRRTFLPEFVRVARQARGVAQAAAAH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctccccgcgccacccccgcccgcacgcgccgcaccgccaaccccatcgac
accacgttgcgcaaggtctttggcctcaagcggctgcggcccggccagctcgaggtgatc
gagcgcgtgctgcagggcacgaacacgctggctgtcatgcccacgggcgcgggcaagtcg
ctgtgctaccaattgcccgccctgctgctgccgggcacgacggtggtggtctcgccgctg
gtggcgctgatgaaggaccagtgcgacgccctgcgcgcgctgggcgtggcggcggtgcag
atcaacagcgccatcggcagcgaggaactcgcggccgcgcgcgaggccgtggagaacggc
agcgcccgcatcgtgctgaccacgcccgaacagattgccgatccggcgctgaccacggcg
ctgtcgcgccatccggtgagcctgctggtggtcgacgaagcccactgcatctccgaatgg
ggccatgacttccgccccgctttcctggagatcgcgccggcggtgcgcgcgctgggccgt
cccgcggtgctggcgctcacggccaccgccaagcccacggtgatgtccgagatcatcgcg
ctgctgggcattgcggccaaggacgtcgtgcaggccggcgcctaccgccccaacctgcaa
tttgccgtcgagccgctggcgcgcgccgccgaccgcctgccccgggcgctggcgctggtg
gcgggctacgcgggatcgggcatcgtctacacggccaccatcaaatgcgccgaggagctg
catgccaagctcgcggccgagggcgagtccgtgggcctgtaccacggccggctcaatgcc
ggcgagcgcgcgcaggcacaggacgacttcatggaaggccgggtgcgcgtgatggtggcc
accaacgcgtttggactgggtatcgacaagcccgatatccgcttcgtgctgcactaccag
atgcctgccagcgtcgatgcctactaccaggaagcgggccgcgcgggccgcgacggcgaa
aacgccacttgcaccttgctctacgtgccgcaggaccgcgcgctgcagagctttttcctg
tcgggccgctacccgtcgctcgacgacctgcaggccatcatggcgttgctgcaccagcca
gcgcccgagggcagctggtcggccgacgccattgtcgaggccgccgagcgcccgcgcgcc
aaggtgctggtggcattgagcctgctgcgcagccacaaggccgtgcgccgcacgcgcgcc
ggccgtttccatgtggtccaggatctcgatgccgcggcgctcgaagccctgctcaccggc
taccgcacgcggcgcgagcaggatggcgcgacgctggaagccatggtggcctatgcgcag
ggcgggcgctgccgctggcaggcggtgctggcggcgctgggcgaagccccctcgttcgac
acctgcggccactgcgacaactgccagcggctggcggcgctgtcgcgcctggcgcccgct
gccgtcgtgccgccgatcgagatccgccctgccgcgccggccaagccgcgcttcgcgggg
ggcgacacggtacgcgccaaacgctacggcgcgggccaggtcgtcgaagccgaccagaac
tcggtgaccgtggagttcccggacggcgtgcgccgcacctttctgccggagttcgtgcgc
gtcgcgcggcaggcacgcggggtggcgcaggcagccgcggcgcattga
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