Comamonas antarctica: HUK68_11635
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Entry
HUK68_11635 CDS
T07217
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aant
Comamonas antarctica
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aant03009
]
HUK68_11635 (rimO)
Enzymes [BR:
aant01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HUK68_11635 (rimO)
Ribosome biogenesis [BR:
aant03009
]
Prokaryotic type
ribosomal protein modification factors
HUK68_11635 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
YajR_YAM
Amidase_5
Motif
Other DBs
NCBI-ProteinID:
QKV53484
UniProt:
A0A6N1X208
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Position
complement(2492749..2494161)
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AA seq
470 aa
AA seq
DB search
MRSDTFDAVATSGSASIPKIGFVSLGCPKALTDSELILTQLSAEGYSTSKTFDGADLVIV
NTCGFIDDAVKESLDTIAEALAENGKVIVTGCLGAKTGADGGNMVQQIHPSVLAVTGPHA
TQEVMDAVHTHLPKPHDPFVDLIPGAFGEAGLKLTPKHYAYLKISEGCNHRCTFCIIPSM
RGDLVSRPVGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLEL
VQALGELAEPHGAWVRLHYVYPYPSVDEIIPLMASGRVLPYLDVPLQHSHPDVLKRMKRP
ASGEKNLERIQRWREMCPDLIIRSTFIAGFPGETEEEFEHLLDFIRAAEIDRAGCFAYSP
VEGATANDIPGMLPPEVREARRARFMEVAEEVSANRLRRRIGSTMQVLVDSAPALGRKGG
VGRSYADAPEIDGVVHLLPPEKISKTMKAGEFTRARIVGTQGHDLVGVPI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagatactttcgacgcagtcgcgacgtccggcagcgcatccattccaaagatc
ggcttcgtcagcctgggctgcccgaaggcattgaccgactccgaactgatactcacgcag
ctcagcgccgaaggctattccacgtccaagaccttcgatggcgccgacttggtgatcgtc
aacacctgcggcttcatcgacgacgccgtcaaggaaagcctggacaccattgccgaggcg
ctggcggaaaacggcaaggtcatcgtcactggctgcctgggcgccaagaccggtgccgac
ggtggcaacatggtgcagcagatccaccccagcgtgctggccgtgaccggcccgcacgcc
acgcaggaggtcatggacgcggtgcacacgcacctgcccaagccgcatgaccccttcgtc
gatctgattcccggtgcgttcggcgaggccggcctcaagctcacgcccaagcactacgcc
tatctgaagatcagcgaaggctgcaaccaccgctgcaccttctgcatcattccttcgatg
cgcggcgatctggtctcgcgtcctgtcggcgatgtgctcaaggaggccaaggcgctgttc
gagggcggcgtcaaggaactgctggtcatcagccaggacacctcggcctatggcgtcgat
gtcaagtaccgcaccggtttctgggacggcaagcccgtcaagacgcgcatgctggagctg
gtacaggccttgggcgaactggccgagccgcatggcgcctgggtgcgcctgcactatgta
tacccgtaccccagcgtggacgagatcattccgctgatggcgtcgggccgcgtgctgccc
tatcttgacgtgccgctgcagcacagccaccccgatgtgctcaagcgcatgaagcgcccc
gccagcggcgagaagaacctcgagcgcatccagcgctggcgcgagatgtgcccggacctg
atcatccgctcgaccttcattgccggcttcccgggtgagaccgaggaggagttcgagcac
ctgctggacttcatccgcgcggccgagatcgaccgcgccggctgctttgcctacagcccg
gtcgaaggcgcgaccgccaacgacattcccggcatgctgccgcccgaggtgcgcgaggcg
cgccgcgcgcgcttcatggaagtggccgaggaagtctcggccaaccgcctgcgccggcgc
atcggctcgaccatgcaggtgctggtcgattccgcgcccgcgctgggccgcaagggcggc
gtgggccgcagctacgccgatgcgcccgagatcgacggcgtggtgcatctgctgccgccc
gagaagatcagcaagaccatgaaggccggcgagttcacgcgtgcgcgcatcgtcggcacc
cagggccacgatctggtcggcgtgccgatctga
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