Comamonas antarctica: HUK68_11720
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Entry
HUK68_11720 CDS
T07217
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aant
Comamonas antarctica
Pathway
aant03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUK68_11720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aant03019
]
HUK68_11720
Enzymes [BR:
aant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUK68_11720
Messenger RNA biogenesis [BR:
aant03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUK68_11720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
QKV53500
UniProt:
A0A6N1X6Q4
LinkDB
All DBs
Position
2510151..2511992
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AA seq
613 aa
AA seq
DB search
MTFEELNLAPAILKAVLEQGYNNPTPIQAQAIPAVLQGQDLLAGAQTGTGKTAAFALPML
NRLLDSDPATSKFGNKGVRALILTPTRELAAQVEESVRAYAKYLDGINSTVVFGGVGMNP
QIDRIKRGVDILVATPGRLLDLQQQGFLDLSTVQILVLDEADRMLDMGFIHDVKKVLALV
PKNKQSLLFSATFSDEIRELANTLLKNPQSIQVTPSNTTVQRITQIIHPVGRGKKKQALL
HIIQEHDWSQVLVFTRTKFGANNVADFLTKNGVSAMALHGNKSQSARTQALAGFKSGDIR
ALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSMVCMDEEGFM
MDIERFTKQEIPVQVLEGFGPEEGEKAEPIAMGRQTIWGGAGKPPSRDVMQAAAKAARSE
MMERIRANKPAAGERGAKPQGGGAQGNGGGRSGGRGAAQANGEARAPGNGPRNANGARGN
GGRGAGARGNGPRQGGQGFGGDRHAEGRHDEHRAPRPPREGGNSRFDDQPPRANAHLGTQ
LGRPVTPRGSSAGGQPDPMRTSVDSMAQAGRRSGGFRNGGGGGGFGGGRSGGGGGFGGGG
RSGGGGGRGGFGR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaagaactgaatctggctcctgccatcctgaaggccgtgctcgaacagggt
tacaacaaccccacgcccatccaggcccaggccattccggccgtgctgcagggccaggat
ctgctggccggcgcacagaccggcacgggcaagaccgcggctttcgcgctgcccatgctc
aaccgcctgctggacagcgatccggcgacgagcaagttcggcaacaagggtgtgcgcgcg
ctgattctcacgccgacgcgcgaactcgcggcccaggtcgaggaatcggtccgcgcctat
gccaaatacctcgatggcatcaactccacggtggtgttcggcggcgtcggcatgaacccg
cagatcgaccgcatcaagcgcggcgtcgacattctggtggccacgcccggccgcctgctg
gacctgcagcagcaagggtttctggacctgtccacggtgcagatcctggtgctggacgaa
gccgaccgcatgctggacatgggctttatccatgacgtgaagaaggtcttggcactggtg
cccaagaacaagcagagcctgctgttctcggccacgttcagcgacgagatccgcgaactc
gccaacacgctgctgaagaacccgcagagcatccaggtcacgcccagcaacaccacggtg
cagcgcatcacgcagatcattcacccggtgggccgcggcaagaagaagcaggcgctgctg
cacatcatccaggaacacgactggagccaggtgctggtgttcacgcgcaccaagttcggc
gccaacaacgtggccgacttcctgaccaagaacggcgtcagcgccatggcgctgcacggc
aacaagagccagagcgcgcgcacccaggcgctggccggcttcaagagcggcgacatccgt
gcgctggtggccaccgacatcgctgcgcgcggcatcgacatcgacgaactgccccacgtc
gtcaactacgaaatccccaacgtctcggaagactacgtgcaccgcatcggccgcacgggc
cgcgccggccgcgagggccatgcggtgagcatggtctgcatggatgaagaaggcttcatg
atggacatcgagcgcttcacgaagcaggagatcccagtgcaggtgctcgaaggcttcggc
cccgaggaaggcgagaaggccgaacccattgccatgggccgccagaccatctggggcggc
gcgggcaagccgcccagccgcgacgtgatgcaggcggccgccaaggccgcgcgctccgag
atgatggagcgcatccgcgccaacaagcccgccgccggcgaacgcggcgccaagccgcag
ggcggcggcgcgcagggcaatggcggtggccgctcgggcggccgcggcgcggcccaggcc
aacggcgaagcccgtgcgcccggcaacggtccgcgcaacgccaacggcgcgcgtggcaat
ggcggccgtggcgccggtgcgcgcggcaatggtccgcgccagggtggccagggctttggc
ggcgatcgccatgccgaaggccgccatgacgagcaccgcgcgccgcgccctccgcgcgaa
ggcggcaactcgcgttttgacgaccagccgccgcgcgccaacgcgcacctgggcacccag
ctgggccgcccggtgacgccgcgcggcagctcggcgggcggccagcccgatccgatgcgc
accagcgtcgacagcatggcccaggcaggccgccgcagcggaggcttccgcaacggtggc
ggtggcggcggttttggtggcggccgcagcggcggtggcggtggttttggcggcggcggc
cgcagcggtggcggcggcggccgcggcggtttcggccgctga
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