Comamonas antarctica: HUK68_18140
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Entry
HUK68_18140 CDS
T07217
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
aant
Comamonas antarctica
Pathway
aant00550
Peptidoglycan biosynthesis
aant01100
Metabolic pathways
aant01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUK68_18140 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HUK68_18140 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aant01011
]
HUK68_18140 (mrdA)
Enzymes [BR:
aant01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HUK68_18140 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
aant01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HUK68_18140 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
DUF2269
Motif
Other DBs
NCBI-ProteinID:
QKV54656
UniProt:
A0A6N1XA95
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All DBs
Position
complement(3896552..3898675)
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AA seq
707 aa
AA seq
DB search
MMEVLDSEAEQSRFRLRVWVIAAVVLLAFCVLVWRLLVLQVVRHEDLAERAESNRTAVVP
IVPNRGQILDRNGVVLATNYAAYTLEITRSKVKDLEATIDELATLVEITPRDRRKFKRLV
EDSKNFESLPIRTRLSDEEVAHFAAQRYRFPGVDIKARLFRSYPLEDTASHVIGYIGRIN
QREKEVIEDSEDAANYRGTEVIGKLGIEQSYEKDLHGLTGWEQLETSAGGYAVRKLGSRA
ATPGDSLVLSLDIRLQRMVEQLYGNRRGALVAIDPRNGEVLAMVSRPTFDLNLFVDGIDQ
ESWSQLNESIDRPMLNRALRGTYPPGSTYKPFMALGALELGARRTDTIVQDNGSWTFGGH
TFRSGHPNGAIDMHRAIVKSSNVYFYQLANDMGVDTMHDFMKPLGFGQLTGLDVRGEARG
VLPSQEWKRNTYKRPEQKKWYAGETISLGIGQGYNNFTLLQLAHAMATLANNGVKHQPHL
GLGKVDALTRRYEPLPQPAGIDLGYKPQNVAAVRRAVAAVTVEGTARGIFMGAPYTSAGK
TGTAQAVSVGQKEKYNAARLSEYQRDHSLYMAYAPADNPTIALALIVENAGFGAVAAGPI
ARRVFDYWLLGQYPSEEDMASVRSGQARTPMGQPRRANDITLPADSVALEGLPRKVLPDP
YPPAAPAEAGAKNSASGAKPATPALRPPTQAAMAAAAAASAAWVPED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagtcctggactccgaagccgaacagtcgcgctttcgcctgcgtgtctgggtg
atcgcggccgtggtgctgctggcgttctgcgtgctggtctggcgcctgctggtgctgcag
gtggtgcgccacgaagacctggccgagcgcgccgaaagcaaccgcacggcggtcgtgccc
atcgtgcccaaccgcggccagatcctcgaccgcaatggcgtggtgctggccaccaactat
gcggcctatacgctggagatcacgcgctccaaggtcaaggacctcgaagccacgatcgac
gaactcgccaccctggtcgagatcacgccgcgcgaccggcgcaagttcaagcgcctggtc
gaggactcgaagaatttcgagtcgctgccgatccgcacgcgcctgagcgacgaggaagtc
gcgcatttcgccgcccagcgttaccgcttccccggtgtcgacatcaaggcccggctgttc
cgctcctatccgctcgaggacaccgccagccatgtgatcggctacatcggccgcatcaac
cagcgcgagaaggaagtgatcgaggactcggaggacgcagccaactaccgcggcaccgag
gtcatcggcaagctgggcatcgagcaaagctacgaaaaggacctgcacggcctcaccggc
tgggagcagctcgagacctcggccggcggctacgccgtgcgcaagctcggcagccgtgcc
gcgacgcccggcgacagcctggtgctgtcgctcgacatccggctgcagcgcatggtcgag
cagctctatggcaaccgccgcggcgcgctggtggccatcgatccgcgcaacggcgaggtg
ctggccatggtcagccgcccgaccttcgacctgaacctgttcgtcgacggcatcgaccag
gaaagctggtcgcagctcaacgaatccatcgaccggcccatgctcaaccgtgcgctgcgc
ggcacctatccgccgggctcgacctacaagccgttcatggcgctgggcgcgctcgagctg
ggcgcgcgccgcaccgacaccatcgtgcaggacaacggcagctggaccttcggcggccac
accttccgcagcggccatcccaacggcgcgatcgacatgcaccgcgcgatcgtcaagtcg
agcaacgtgtacttctaccagctggccaatgacatgggcgtcgacaccatgcacgacttc
atgaagccgctgggcttcggccagctcaccgggctcgatgtgcgcggcgaggcccgcggc
gtgctgcccagccaggagtggaagcgcaacacctacaagcgccccgagcagaagaaatgg
tatgcgggcgagaccatctcgctgggcattggccagggctacaacaacttcacgctgctg
cagctcgcgcatgcgatggccacgctggccaacaatggcgtgaagcaccagccgcacctg
ggcctgggcaaggtcgacgcgctgacgcggcgctacgagccgctgccccagcccgcaggc
atcgacctgggctacaagccgcagaacgtcgcggcggtgcggcgcgcggtcgcggccgtc
acggtcgagggcacggcgcgcggcattttcatgggcgcgccctatacctcggccggcaag
accggcacggcccaggccgtgagcgtgggccagaaggaaaaatacaatgccgcccggctc
agcgagtaccagcgcgaccactcgctctacatggcgtacgcgcctgccgacaatccgacg
atcgccctggcgctgatcgtcgagaacgccggctttggcgcggtggcggccgggccgatc
gcgcgccgggtattcgactactggctgctgggccagtatcccagcgaagaagacatggcc
tcggtgcgctcgggccaggcgcgcacgcccatgggccagccgcgccgcgccaacgacatc
accctgcccgccgacagcgtcgcgctcgaaggcctgccgcgcaaggtcctgcctgatccc
tacccgccggccgcacccgccgaggccggcgccaagaacagtgcgtccggagccaagccc
gccacgcccgcgctgcggccgccgacccaggcggcaatggctgcagcggcggccgccagc
gcggcctgggtgcccgaggactga
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