Comamonas antarctica: HUK68_19210
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Entry
HUK68_19210 CDS
T07217
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
aant
Comamonas antarctica
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aant03000
]
HUK68_19210 (prpR)
Transcription factors [BR:
aant03000
]
Prokaryotic type
Helix-turn-helix
Other families
HUK68_19210 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS
PAS_4
AAA_5
Mg_chelatase
AAA_2
PAS_8
AAA
HTH_30
IstB_IS21
AAA_16
HTH_23
PAS_7
HTH_psq
bpMoxR
AAA_19
AAA_3
AAA_7
HTH_24
HTH_50
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QKV54855
UniProt:
A0A6N1XAM2
LinkDB
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Position
complement(4142779..4144707)
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AA seq
642 aa
AA seq
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MPSISPPLPAAADLPRLLIVSAYELAEVALSVTPQFQGRAQIHVERGNLERGVELVRKAV
AQQGVEVVVSAGSNASYLRSRIEVPLVTVRVGGFDIMAALATARAAQGDIALVFFREIPD
DVARFLRQFDLPVQLHAYESEAHAHALVEQLAASGVTAIVGPGVAVRAAQLRGLRGVLLY
SRDSIAAAMEEALQLVLSRRAERSERERLAAVLRHLDSGVVATDAQGQVLAANPAADALT
GVALTAAVGQPLQHLLPALDARAVQDRVARVHEWAQRKVLVQGQPIMESGRPHGAVFTLE
RASHVEQAFRKLRAHERERSQPARYTLAHVVQASAQMQAVVRRCETVAALTEAPVLITGP
TGVGKELIAQGIHSASRRRGQRFVAVNCGALTESLLESELFGYEDGAFTGARREGKAGLF
EAAHRGTVFLDEIGELPFALQTRLLRVLQEREVTRVGASAPVPIDIRVLAATHRDLAAMV
QQGSFREDLYFRIAVLRIDLAPLAERPADLLLLADMMVQSAMREIGLAQSMQPVLRLLPA
VVARHRWPGNARELHNFAQRVAVRCVELAGTPDLAELLALIDHPALPDSAPAASLAAGRS
LHEQRHIQQVLADCGGDQGAAAKALGISRTTLWRRLKGQAGH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgatatcgccccccctgcccgcggccgccgacctgccgcgcctgctgatcgtc
agcgcctacgagctggccgaggtggcgctgtccgtcacgccgcagttccagggccgtgcg
cagatccatgtcgagcgcggcaatctggagcgcggcgtggaactggtcagaaaagccgtc
gcgcagcaaggcgtcgaagtggtcgtcagcgccggctccaacgccagctacctgcgcagc
cgcatcgaggtgccgctggtcacggtgcgcgtcggcggcttcgacatcatggcggcgctg
gccaccgcgcgcgccgcgcagggcgacatcgcactggtgttcttccgcgagattcccgac
gacgtggcgcgctttctgcgccagttcgatctgccggtgcagctgcatgcctacgaatcc
gaagcccatgcgcacgcgctggtcgagcagctcgcggccagcggggtcacggccatcgtc
ggcccgggcgtggcggtgcgcgcggcgcagttgcgcggcctgcgcggcgtgctgctgtac
tcgcgcgactcgattgccgcggccatggaagaggcgctgcagctggtgctgtcgcggcgc
gccgaacgctcggagcgcgagcgcctggccgccgtgctgcgccatctcgacagcggcgtg
gtggccaccgatgcgcagggccaggtgctggccgccaaccccgcggccgatgcgctgacc
ggcgtggcgctgaccgcggccgtgggccagccgctgcagcacctgctgcccgcgctcgat
gcacgcgccgtgcaggaccgcgtggcgcgcgtgcatgaatgggcgcagcgcaaggtgctg
gtgcagggccagccgatcatggagagcgggcgtccgcatggcgcggtcttcacgctcgag
cgcgcaagccatgtcgaacaggcctttcgcaagctgcgcgcgcacgagcgcgagcgcagc
cagcccgcgcgctacacgctggcgcatgtggtgcaggcctcggcccagatgcaggccgtg
gtgcggcgctgcgaaaccgtggccgcgctcaccgaagcaccggtgctgatcaccgggccc
accggtgtgggcaaggagctgattgcgcagggcatccacagcgccagccggcgccgcggc
cagcgcttcgtggcggtgaactgcggcgccctcaccgagagcctgctcgagagcgagctg
ttcggctatgaggatggcgccttcaccggcgcgcgccgcgaaggcaaggccgggctgttc
gaagccgcgcaccgcggcacggtgtttctcgacgaaattggcgagctgccgtttgcgctg
cagacgcggctgctgcgcgtgctgcaggagcgcgaggtcacgcgcgtgggcgccagcgcg
ccggtgccgatcgacatccgcgtcctcgccgcgacgcaccgcgatctcgcggccatggtg
cagcagggcagcttccgcgaagacctgtactttcgcatcgcggtgctgcgcatcgacctg
gcgccgctggccgagcgtcccgccgacctgctgctgctggccgacatgatggtgcaaagc
gcaatgcgcgagatcggcctggcgcagtcgatgcagccggtgctgcgcctgctgcctgcg
gtcgtcgcgcgccaccgctggcccggcaacgcacgcgagctgcacaacttcgcgcagcgc
gtcgcggtgcgctgcgtggagctggccggcacgcccgatctggccgaactgctggcgctg
atcgaccatcctgcgctcccggactccgcgcctgcggcctcgctggcggctgggcgcagc
ctgcatgagcagcgccatatccagcaggtgctcgcggactgcggcggcgaccagggtgcg
gcggcaaaagccctgggcatcagccgcaccaccctctggcgacggctcaagggccaggcc
ggccactga
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