Comamonas antarctica: HUK68_19435
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Entry
HUK68_19435 CDS
T07217
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aant
Comamonas antarctica
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aant03032
]
HUK68_19435 (gyrB)
03400 DNA repair and recombination proteins [BR:
aant03400
]
HUK68_19435 (gyrB)
Enzymes [BR:
aant01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HUK68_19435 (gyrB)
DNA replication proteins [BR:
aant03032
]
Prokaryotic type
DNA Topoisomerases
HUK68_19435 (gyrB)
DNA repair and recombination proteins [BR:
aant03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUK68_19435 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QKV54891
UniProt:
A0A6N1X6C7
LinkDB
All DBs
Position
complement(4202849..4205458)
Genome browser
AA seq
869 aa
AA seq
DB search
MTADTTLPEPQGDSIEPAHKIDAQQAGASEGYGEGAIQILEGLEAVRKRPGMYIGDTSDG
TGLHHLVFEVVDNSIDEALAGHCDDILVTIHADNSLSVIDNGRGIPTRVKMDDKHEPKRS
AAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSSWLKLTVRREGQAFEIDFARGF
VQNRLIEEVNGVEISPMRVIGPSDKRGTKVHFLPDTEIFTQNNEFHYEILAKRLRELSFL
NHGVRIRLKDERSGKEDDFSGAGGVQGFVNFINANKKVLHPTPFYATGTRPAESYGGIPG
TEIGVEVAMQWNDGYSEQVLCFTNNIPQRDGGTHLTGLRAAMTRVIGKYIEQNELAKKAK
VEVTGDDMREGLCCVLSVKVPEPKFSSQTKDKLVSSEVRAPVEDIVAKTLAEFLEERPTD
AKLLCGKIIEAARAREAARKAREMTRRKGVLDGMGLPGKLADCQEKDPALSEIYIVEGDS
AGGSAKQGRDRKFQAILPLRGKILNVEKARYEKLLASQEIITLITALGTGIGKASVESGK
SSSDDFDPGKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKV
KSGKEELYLKDGPALNSYLLRIALNHASVTTGGAQPRTLEGEELAKLAYMHLAAEAVIER
LSAFMDAEALRAIADGVQIKLDTLEEAQACAPILEAKLRELTTTGVPAEVAGEIDPQSDN
PVLRISRHHHGNIKSSILTQDFVRSNDYAALSAEAQHFNGLLAEGAKAIRGEGDKARSER
VTDFRQAMQWLISEAERTTSRQRYKGLGEMNPAQLWETTMDPNVRSLLQVGISDAIEADR
VFTMLMGDDVEPRRNFIEANALRAGNIDV
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgacacaacgctgcccgaaccccaaggcgactcgatcgagccggcccacaag
atcgacgcccagcaggccggcgccagcgaaggctacggcgaaggcgcgatccagatcctc
gaaggcctggaagccgtgcgcaagcgccccggcatgtacatcggcgacacctccgatggc
acgggcctgcatcacctggtcttcgaagtggtggacaactccatcgacgaagcgctggcc
ggccactgcgacgacatcctggtcaccatccacgccgacaactcgctgtccgtcatcgac
aacggccgcggcatcccgacgcgcgtgaagatggacgacaagcacgagcccaagcgctcg
gccgccgagatcgcgctgaccgagctgcatgccggcggcaagttcaaccagaacagctac
aaggtgtcgggcggcctgcacggcgtgggcgtgtcctgcgtcaacgccttgtcgtcgtgg
ctcaagctcacggtgcgccgcgaaggccaggccttcgagatcgacttcgcgcgcggcttc
gtgcagaaccggctgatcgaagaggtcaacggcgtcgagatctcgccgatgcgcgtcatc
ggtccgagcgacaagcgcggcaccaaggtccacttcctgcccgacaccgagatcttcacg
cagaacaacgagttccactacgagatcctggccaagcgcctgcgcgagctgtccttcctg
aaccacggcgtgcgcatccgcctcaaggacgagcgctcgggcaaggaggacgacttctcc
ggcgccggcggcgtgcagggcttcgtgaacttcatcaacgccaacaagaaggtgctgcac
cccacgcccttctacgccacgggcacgcgcccggccgagtcctatggcggcattcccggc
accgagattggtgtcgaggtcgcgatgcagtggaacgacggctacagcgagcaggtactg
tgcttcaccaacaacatcccgcaacgtgacggcggcacccacctcacgggcctgcgcgcc
gcgatgacgcgcgtcatcggcaagtacatcgagcagaacgaactggccaagaaagccaag
gtcgaggtcacgggcgacgacatgcgcgaaggcctgtgctgcgtgctcagcgtcaaggtg
cccgagcccaagttctcgagccagaccaaggacaagctggtgtcgagcgaagtgcgcgcg
ccggtcgaggacatcgtcgccaagaccctggccgaattcctcgaggagcgccccaccgac
gccaagctgctgtgcggcaagatcatcgaagccgcgcgcgcgcgtgaagccgcgcgcaag
gcgcgtgaaatgacgcgccgcaagggcgtgctcgacggcatgggcctgcccggcaagctc
gccgactgccaggaaaaagacccggcgctcagcgaaatctacatcgtcgagggcgactcc
gccggcggctccgccaagcagggccgcgaccgcaagttccaggccatcctgccgctgcgc
ggcaagatcctgaacgtcgagaaggcgcgctacgagaagctgctcgccagccaggaaatc
atcacgctgatcacggcgctgggcaccggcatcggcaaggccagcgtcgaatcgggcaag
agcagcagcgacgatttcgacccgggcaagctgcgctaccaccgcatcatcatcatgacc
gatgcggacgtcgacggcgcccacatccgcaccctgctgctgaccttcttctaccgccag
atgcccgaactcgtcgagcgcggccacatctacatcgcgcagccaccgctgtacaaggtc
aagagcggcaaggaagagctctacctcaaggacggcccggcgctcaacagctacctgctg
cgcatcgcgctgaaccacgccagcgtcaccaccggcggcgcccagccgcgcacgctcgaa
ggcgaagagctggccaagctggcctacatgcacctggccgccgaagccgtcatcgaacgc
ctctcggccttcatggacgccgaagccctgcgcgcgattgccgacggcgtgcagatcaag
ctcgacacgctggaagaagcccaggcctgcgctccgatcctcgaagccaagctgcgcgaa
ctcaccacgaccggcgtccccgccgaggtcgcgggcgagatcgacccgcagtccgacaac
ccggtgctgcgcatcagccgccaccaccacggcaacatcaagagctcgatcctgacccag
gacttcgtgcgcagcaacgactacgccgccctctccgccgaagcccagcacttcaacggc
ctgctcgccgaaggcgccaaggccatccgcggcgaaggcgacaaggctcgctccgaacgc
gtcaccgacttccgccaggccatgcaatggctgatctccgaagccgaacgcaccaccagc
cgccagcgctacaagggtctgggtgaaatgaacccggcgcagctgtgggagacgacgatg
gatcccaatgtgcgtagcctgctgcaggtgggcatcagcgatgcgatcgaggcggatcgc
gtgttcacgatgctgatgggggatgatgtggagccgcggaggaattttattgaggccaat
gcgctgagggcggggaatattgacgtttga
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