Comamonas antarctica: HUK68_20935
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Entry
HUK68_20935 CDS
T07217
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
aant
Comamonas antarctica
Pathway
aant02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
aant00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUK68_20935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aant03021
]
HUK68_20935
Transcription machinery [BR:
aant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUK68_20935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
GerE
HTH_20
HTH_IclR
HTH_11
PhyR_sigma-like
HTH_40
HTH_10
TnsD
HTH_28
MarR_2
MarR
HTH_3
Xre-like-HTH
HTH_17
HTH_7
HTH_29
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
QKV55389
UniProt:
A0A6N1X7L9
LinkDB
All DBs
Position
unnamed1:complement(337951..338460)
Genome browser
AA seq
169 aa
AA seq
DB search
MPATVDPARREVAGLYSAHQRWLSSWLRQRLGDSHQAADLCHDIFVRLLAREEPVDAREP
RAFLTTVAQRMLFSHYRRQQLERAYLEALRHCAPALAMSPEERAIVLETLVEIDRLLDGL
PVVVRRAFLMSQLDGLKQAEIAERLGISLATVKRHLVKAGMHCLLALEP
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgtggaccctgccaggcgcgaagtcgccggactgtacagcgcgcaccag
cgctggctgagcagctggttgcgccagcggctgggcgattcgcaccaggccgccgacctg
tgccatgacatcttcgtgcgactgctggcgcgtgaggagccggtggatgcgcgcgagccg
cgcgcgtttctcaccaccgtcgcccaacgcatgctgttcagccattaccggcgccagcaa
ctcgagcgcgcgtatctggaggcattgcgccactgcgccccggcgctggccatgtcgccc
gaggagcgcgccatcgtgctggaaacgctggtcgagatcgaccgtttgctcgacggcctc
ccggtggtggtgcggcgcgcgttcctgatgagccagctggacggtctcaagcaggccgag
atcgccgagcggctgggcatctcgctggccacggtgaagcgccatctggtcaaggccggc
atgcattgcctgttggcgctggagccctga
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