Aggregatibacter actinomycetemcomitans ANH9381: ANH9381_1938
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Entry
ANH9381_1938 CDS
T01651
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aao
Aggregatibacter actinomycetemcomitans ANH9381
Brite
KEGG Orthology (KO) [BR:
aao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aao03019
]
ANH9381_1938
Enzymes [BR:
aao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ANH9381_1938
Messenger RNA biogenesis [BR:
aao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ANH9381_1938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
ResIII
T2SSE
nSTAND3
AAA_30
NACHT
AAA_25
DUF6145
SLFN-g3_helicase
nSTAND_NTPase5
TsaE
DUF1664
Motif
Other DBs
NCBI-ProteinID:
AEW77840
LinkDB
All DBs
Position
complement(1825746..1829795)
Genome browser
AA seq
1349 aa
AA seq
DB search
MNKRTIKQELNPLQQSLFTQLNDVMLSDKRRLSESIHGIGKIKSTDAQQAVIAEIEQQIH
LAKLRVEQRKSAVKNLIVFPESLPVSQRKAEIEKLLSEHQVIVVAGETGSGKTTQLPKMC
LELGLGNLGMIGHTQPRRIAARSVAARIAEELQTELGDLVGYKVRFNDQISDNTQIKLMT
DGILLAEIQTDRFLNQYACLIIDEAHERSLNNDFILGYLKQLLPRRPDLKLIITSATIDV
ERFSKHFDNAPIIEVSGRTYPVEVRYRPITEEDDQDQLQGILNAVDELQAEGRGDILIFM
NGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVLATNVAETSLTV
PGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF
NNRPEFTDPEILRTNLASVILQMTVLGLDAIEAFPFVDAPDKRHIQDGVKLLEELGALEW
KAIRKSPPSAFGTSPRKQGEGKGILSEEGSSLPPFTGGSARRAEGGNTPTFKEKRVLTHL
GRQLAQLPVDPCLAKMLLSAVNFCSVYEVMIIVSALSIQDLRERPTEKQQAADEKHRRFA
DKKSDFLAFLNLWNYLQEQQKALSKNQFRRQCQKDFLNYLRIREWQDIYQQIRLAVREMG
LPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVM
AAELVETSKLWGRMVAEIEPEWIEPLAEHLVKKSYSEPRWSKSRGAVIADEKVSLYGVPI
VAGRPVNYGAIDPVVSREIFIQSALVEGDWNTKHPFFKQNQQLIREVEELEHKSRRRDIL
VDERTLFEFYDQRIGTDVVSQKHFDTWWKKASKQDPELLNFERSFLINDDVEQVSKLDFP
NFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQIPGLREELVIALIKS
LSKSYRRNFVPAPNYAQAFLGRAVPLEKPLLDTLIYELRRMTGVTVEAEHWNWAQIPSHL
KMTFRVVDEKGKKIAESMDLDALKFELKDRVQESISAVADDGIEQSGAHIWNFADLPQFY
EQKKQGFSVKAFPAIVDEKDAVGVKLFETEFEQAVAMQQGLRRLLLLNVPSPIKYLHEKL
PNKSKLGLYFTPFGRVMDLIDDCIACAVDKLIADFGGFVWNEEGFEKLRDFVRENLNDVT
VDIAQKVEQILTLTHQLNQRLKGKMDFTMAFALSDIKSQLSGLVYQGFVQKSGYHRLPDL
LRYLQAIDKRIDKLSQDVNRDRAAMLRVEQVQQAYQQLLAKLPKSKPISDEVAEIRYMIE
ELRVSLFAQQLGTKYQVSEKRVLNTIGTF
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaagaacgataaaacaagaacttaatcctttacaacaatcccttttcacacaa
ctgaatgacgtcatgctttcggataaacgccgtttatccgaaagcattcacggcattggc
aaaataaaaagcactgatgcgcaacaggcggtgatagcggagattgaacagcaaattcac
ctcgccaaattgcgcgtagaacaacgcaaaagtgcggtcaaaaatttgattgtttttccg
gaaagtctgcctgttagccaacgcaaagcggaaatcgaaaaattattgtccgaacatcaa
gtgattgtggtggcgggggaaaccggttcaggcaaaaccactcagttgccgaaaatgtgc
ctggagttggggttaggcaatcttggcatgattgggcatactcaaccacgccgtattgcc
gcccgctccgtcgccgcgcgtattgcggaagaattgcaaacggaactgggcgatttggtc
ggttacaaagtgcgttttaacgaccaaatcagcgacaacacccaaatcaagttaatgact
gacgggattttgctggcggaaattcaaacggatcgttttctcaaccaatatgcctgcctg
attatcgacgaagcccacgaacgcagtctgaataacgattttattctcggctatttgaaa
cagctcctgccgcgtcgccctgatcttaaattgattatcacgtccgcaaccattgatgtg
gagcgtttttccaagcatttcgataatgcgccgattattgaagtctccggcagaacttat
cctgtggaagtgcgttatcgtcctattacggaagaagacgatcaagaccagctacaaggc
attttaaatgcggtggacgagctacaagcggaagggcgcggtgatattttgatttttatg
aacggcgaacgggaaatccgcgacaccgctgaagccctgcaaaagcaaaatttaaaacac
acggaaatcctaccgctctttgcgcgcctttctgcgcaagaacaaaacaaaattttccac
ccgagcggacttaatcgcatcgtgcttgccaccaacgtggcggaaacttccctcaccgtg
ccgggcattaaatacgtcatcgaccccggcactgcgcgcatttcccgttacagttaccgc
accaaagtgcaacgtcttcccattgaacccatttcacaagcctccgccaatcagcgtaaa
gggcgttgcgggcgtgtgagcgaaggcatttgtattcgtctttattcggaagacgatttc
aacaatcgcccggaatttaccgatccggaaatcctgcgaaccaatttggcgtcggtgatt
ttgcaaatgacggtgttgggtttggatgctattgaagccttcccgttcgtggatgcaccg
gataaacggcatattcaggatggcgtgaaattgttggaagaattgggggcgttggaatgg
aaggctattcgcaaatctcccccctccgccttcggtacttccccccgtaaacagggggag
ggaaagggtattttatcagaagaaggatcttcgctccctccgtttacagggggatctgcc
cgtagggctgagggggggaatactccaactttcaaagaaaaacgtgttctcacacacctc
ggtcgccaacttgcccagctcccagtcgatccatgcttggcaaaaatgctactaagtgcg
gtcaatttttgcagcgtttatgaagtaatgatcatcgtttcggcgttatccattcaggat
ctgcgcgaacgtccgacggaaaaacaacaggcagcggacgaaaaacatcgtcgttttgcc
gataaaaaatcggatttcttggcgttcttgaacctgtggaattatctgcaagaacaacaa
aaagcgctgagcaaaaaccaattccgtcgccaatgtcaaaaagatttcctcaattacctg
cgcattcgcgaatggcaggatatttatcagcaaattcgtctggcggtgcgtgaaatgggc
ctgccgattaattccgaaaaagccgaatatcagcaaattcataccgcacttttaagtggc
ttgttgtcccatatcgggctgaaagaagcggaaaaacaacaatatctcggcgcgcgcaac
gcccatttcgccattttccccaattccgtgcttttcaaaaaacaaccgaaatgggtaatg
gcggcggagctggtggaaacttccaaactttgggggcgcatggtagcggaaattgagccg
gaatggattgagcctttggctgaacatctggtgaaaaaatcctattccgaaccgcgttgg
tcgaaatctcgcggggcggtgattgccgatgagaaagtgagcttgtacggcgtgccgatt
gtggcggggcgccctgtgaattacggcgctatcgatcctgtggtgagccgtgagatcttt
attcaatcggcgttggtagaaggcgattggaatacgaagcacccattcttcaagcaaaat
caacagctgattcgtgaagtggaagaactggaacacaaaagccgccgtcgtgatattttg
gtggatgagcgcacgttgtttgaattttacgaccaacgcatcggcacagacgtggtgtct
caaaagcattttgatacctggtggaaaaaagcctcaaaacaggatccggaactgctgaat
ttcgagcgttccttcctgattaatgatgacgtggaacaggtcagcaagctggatttcccg
aatttctggcatcaaggtaatttaaaactcaagctcacgtatcaatttgaaccgggcacc
gacgcagatggcgtgacggtgcatattccgttgccgttgctcaatcaggtggaaatgacg
ggctttgactggcaaattccgggcttgcgtgaagaactggtgattgcgctgattaaatct
ttgtcgaaatcctaccgtcgtaattttgtgcccgcgccgaattacgctcaagccttttta
gggcgagccgtaccattggaaaaaccgctgttagatacgctgatttatgaattgcgccgt
atgacgggtgtgaccgtggaagcggaacattggaactgggcacaaattccaagccatttg
aaaatgaccttccgcgtggtggatgaaaaaggcaagaaaattgccgaatcgatggatttg
gacgcgctgaaatttgagctgaaagaccgtgtgcaggaaagcatttctgcggtggcagac
gacggcattgaacaaagcggtgcgcacatttggaatttcgccgacctgccgcaattttat
gagcagaaaaaacagggtttcagcgtcaaagccttcccggcaatcgtcgatgaaaaagat
gccgtgggtgtgaaactctttgaaacggaatttgagcaagcggtggcaatgcaacaaggt
ctgcgtcgattattactgctcaacgtgccgtcgccgattaaatacctgcacgaaaaattg
ccgaataaatccaaactcgggctttatttcacgccgtttggtcgcgtaatggatttgatt
gacgattgcatcgcctgcgccgtggataaacttattgcggatttcggcggttttgtgtgg
aacgaagaaggctttgaaaaactgcgcgattttgtgcgggaaaacctcaatgatgtcacc
gtggatattgcacaaaaagtagagcaaatcctcacgctcacccatcaattaaaccaacgg
ctgaaaggcaaaatggatttcaccatggcgtttgccttatcggacattaagtctcaatta
agcggcttggtgtatcaaggttttgtgcaaaagagcggttaccatcgcctaccggattta
ctgcgttatttacaagccattgataaacgcatcgacaaactttcgcaagatgtgaatcgc
gatcgtgcggcaatgttacgcgtggaacaggttcaacaggcttatcaacagttgctcgcc
aaactcccgaaatctaaaccgatttctgatgaagtggcagagattcggtacatgatcgaa
gaattgcgtgtgagtttatttgcacagcagttggggacgaagtatcaggtttcggagaag
agggttttgaatacgattggaacattctaa
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