Aggregatibacter aphrophilus NJ8700: NT05HA_0052
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Entry
NT05HA_0052 CDS
T00929
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03030
DNA replication
aap03430
Mismatch repair
aap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT05HA_0052
03430 Mismatch repair
NT05HA_0052
03440 Homologous recombination
NT05HA_0052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aap03032
]
NT05HA_0052
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_0052
Enzymes [BR:
aap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT05HA_0052
DNA replication proteins [BR:
aap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NT05HA_0052
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NT05HA_0052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
KH_SLS1_1
GerT_C
Motif
Other DBs
NCBI-ProteinID:
ACS96500
LinkDB
All DBs
Position
complement(52622..53722)
Genome browser
AA seq
366 aa
AA seq
DB search
MQFIISRENLLKPLQQVCGVLNSRPNIPVLNNVLLQIENNQLNITGTDLEVELSTKTPLL
HAEQDGKFTIPAKKFLDICRSLPENAEITVTFEEDRAIVRSDRSKFNLSTLPAEDYPNLT
DWQSEVDFTLEQATLRRLIEATQFSMANQDARYFLNGMKFETEGNLLRTVATDGHRLAVC
TIPLEQDLQTHSVILPRKGVLELARLLEPSDQPARLQIGTNNLRIQLNNITFTSKLIDGR
FPDYRRVLPRNATRIVEAGWETLKQAFVRAAILSNERFRSVRLQLSENQLKITATNPEQE
VAEEIIDVSYSGEEMEVGFNVSYILDVLNALKCNQVRMRLTDASSSCLIEDCEDASAEYV
IMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttattatttctagagaaaatttattaaagccattacagcaagtgtgtggcgta
ttaaatagtcgcccgaatattcctgtgttaaataacgtcctactgcaaattgaaaataat
caattaaacattaccggtacggatttagaagtggagctttccaccaaaacgccattactt
cacgcagaacaagacggcaaattcacgattccggcaaaaaaattcttagatatttgtcgt
agtttgccggaaaacgcggaaattaccgtcacatttgaagaagatcgcgctattgtacgt
tctgatcgcagtaaatttaatttatccaccttgccggcggaagattatccgaacctcaca
gattggcaatcagaagtggatttcacgcttgagcaagcgacactacgtcgtttgattgaa
gccactcaattttccatggcaaaccaagacgcgcgctatttcttaaatggtatgaaattt
gaaacggaaggcaatttattgcgcaccgtcgcaaccgatggccaccgtttggcagtttgt
actattccattagagcaagatttacaaacccattcagtgattctaccgcgtaaaggcgtg
ttagaactggcacgtttattggaaccaagcgaccaaccggcgcgtttgcaaatcggtacc
aataacctgcgcattcaattaaacaatattacattcacatcaaaactcattgacggtcgt
ttccctgattaccgtcgtgtgttgccacgcaatgcgacccgcatcgttgaggcaggttgg
gaaaccttaaaacaagcctttgtacgcgcagcgattttatctaacgaacgtttccgtagc
gtacgcttacaactgagcgaaaatcaactgaaaatcaccgcgaccaacccggaacaagag
gtggctgaagaaatcattgatgtttcttacagtggcgaagaaatggaagtgggctttaac
gttagctacattctcgacgtgttgaatgcgttgaaatgcaaccaagtgcgtatgcgctta
actgatgcctcttccagctgcttaattgaagactgtgaagacgccagcgcagaatatgtg
attatgccaatgcgtttataa
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