Aggregatibacter aphrophilus NJ8700: NT05HA_0378
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Entry
NT05HA_0378 CDS
T00929
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aap03016
]
NT05HA_0378
Enzymes [BR:
aap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NT05HA_0378
Transfer RNA biogenesis [BR:
aap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NT05HA_0378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACS96805
LinkDB
All DBs
Position
complement(388010..389989)
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AA seq
659 aa
AA seq
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MFQDNPLLAQLKQQIHDSKERVEGIVKSTDKAYGFLECDKKSYFISPVAMKKVMHGDKIS
ATIEKQGDKEQAEPEALIEPMLTRFIAKVRFNKDKKLQVLVDHPNINQPIGAAQSKAVKE
ELQEGDWVVATLKTHPLRDDRFFYAQITQFICHADDELAPWWVTLARHEQPREPVQGQEH
YEMQDQETRENLTALHFVTIDSETTQDMDDALYIEPIASNGEQTGWQLVVAIADPTAYIS
LNSQIEKDAKQRCFTNYLPGFNIPMLPRELSDELCSLKPHETRPALVCYIQTDLQGNISA
PAKFVLADVQSKDKLTYNQVSDYLEGKDNAWQPENPETAQQIQRLHQFTLTRTQWRKTHA
LLFKEKPDYSFVLAENGKVQEIKAEYRRIANQIVEESMIIANICAAQFLHENLQCGIFNT
HSGFDKKFLENAHNFLLANLANDENKADLQTRYALENLATLNGYCQMRHDIEPIEGDYLE
FRLRRFLTFAEFKAELAPHFGLGLKGYATWTSPIRKYSDMVNHRLIKAHLANRDFAKPEE
RVLARLQEARRQNRLVERDIADWLYCRYLADKVESKVEFEAEVQDVTRGGLRVMLLENGA
SMFIPASTLHDNREEITINNDEIAFYIKDQRQYKIGDLIRVQLNEVKENTRSIVGTILK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagataatccattactcgcacaactcaaacaacaaattcacgatagtaaagaa
cgcgtagaaggcatagtaaaaagcaccgataaggcttatggctttttggaatgcgacaaa
aaaagctatttcatctcccctgtcgctatgaaaaaagtgatgcacggcgacaaaatcagt
gccactatcgaaaaacaaggcgataaagaacaagcggaaccggaagccttaatcgagccg
atgcttacccgttttatcgctaaagtgcggttcaataaagacaagaaattgcaggtgctt
gttgatcaccctaacatcaatcagcccattggcgctgcgcaaagcaaagccgtcaaagaa
gaattacaggaaggcgattgggttgtggcaaccttaaaaacccaccctttgcgcgacgat
cgttttttctatgcgcaaatcactcaatttatttgccacgccgatgatgaactggcacct
tggtgggtgacccttgcgcgtcacgaacaaccgcgtgaaccggtacaaggacaagagcac
tatgaaatgcaggatcaagaaacacgcgaaaatctgaccgcacttcacttcgtcaccatc
gactctgaaaccacgcaggacatggacgacgccttatatattgagcctattgcctcaaac
ggtgaacaaaccggctggcaattagtggtggccattgccgacccaacggcttacatcagt
ttaaattcacaaatcgaaaaagacgccaaacaacgttgtttcaccaattatctgcccggc
ttcaatattccgatgttgccacgggaactttccgatgagctttgttccttaaaacctcac
gaaacccgtcctgcattggtttgctacattcaaacggacttgcagggcaacatcagtgca
ccggcaaaatttgtgttagccgatgtgcaatcaaaagataaattgacgtacaaccaagtt
tccgattacttagaaggcaaagacaatgcttggcagccggaaaatccggaaacggcacag
caaattcagcggttgcatcaatttaccctaaccagaacgcaatggcgcaaaacccacgca
ctgctttttaaagaaaaaccggattattctttcgtgctggcagaaaatggcaaagtgcaa
gaaattaaggcggagtatcgccgtattgccaaccaaatcgtggaagaatccatgattatc
gcgaatatctgcgccgcccaatttctacatgaaaacttacagtgcggcatttttaacacg
cacagcggatttgataaaaaattcttggaaaacgcccacaatttcttgttagccaattta
gccaatgatgaaaacaaagcagacttacaaacccgttatgcgctagaaaatcttgcaacc
ttaaacggctattgccaaatgcgccatgatatagaaccgattgaaggggattatttggaa
ttccgtttacgtcgttttctcactttcgcagaatttaaagcggaattggcaccacacttt
ggcctaggcttaaagggctacgccacgtggacatcgccaatccgcaaatattccgatatg
gtgaaccatcgcttaatcaaagcccatttagccaaccgcgattttgccaaacctgaagaa
agggtacttgcccgcttgcaagaagcacgtcgccaaaatcgtttagtggaacgtgatatt
gccgattggctatattgtcgttatttggcggataaggtggaaagcaaagtcgaatttgaa
gccgaagtgcaagatgtcacccgcggcggcttgcgtgtcatgctgttggaaaacggtgcc
tccatgtttatcccggcctccacactccatgacaaccgagaggaaatcaccataaataat
gatgaaatagccttctacattaaagatcagcgccaatataaaatcggcgatcttatccgt
gtgcaactgaacgaagtaaaagaaaacacacgaagtatcgtaggaaccatcttaaaataa
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