Aggregatibacter aphrophilus NJ8700: NT05HA_0866
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Entry
NT05HA_0866 CDS
T00929
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NT05HA_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_0866
Enzymes [BR:
aap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NT05HA_0866
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT05HA_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_22
UvrD-helicase
SH3_13
SLFN-g3_helicase
nSTAND3
AAA_16
DEAD
TrwB_AAD_bind
AAA_7
CbiA
ResIII
PhoH
UvrD_C
NTPase_1
T2SSE
DUF7226
NACHT
AAA
AAA_28
SRP54
ATPase
NPHP3_N
Zeta_toxin
AAA_33
MeaB
DO-GTPase1
AAA_24
AAA_29
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACS97251
LinkDB
All DBs
Position
complement(879885..881864)
Genome browser
AA seq
659 aa
AA seq
DB search
MLALLSQLKEKGIINAADYYFAEFIHRKQQPFQYASSIQNLAVLMAALCNFSYRQGNTCI
LLNQSTEQDLFGLQDYFNERVYLTEIQQKIDYVPIAQWQTKLLDAQHIAFSAEPLKQIAP
LVLQFDRLYFYRIWQDEFRIADYFKSAVRFQHVFLAEQIAQIAPILNRYFHEEQGIDWQK
IAVAMALRQRFCLITGGPGTGKTTTVTKLLLTLQELHQNSLRIKLVAPTGKAAARLTESI
VDAVGRLKQTFSTEKHEREIIENLRIPMNAETLHRLLGVRFFSEETRYYADNPLPVDMLV
VDEASMIDLTLMAKLLNALKPETKLILLGDKDQLASVEAGAILGELGRFVNASAPTYSLA
MAQYLQETTGISLAASERGNPISDSICYLQVSRRFGANPEVGALAAAVNSGNAAESWQLL
QQYQQHQAKKCGVYLTDFARYLTNKEDSQQRKTCVKLIVERAAEEYRRYLQLISQEGQMD
EEKVRSIFAAFNGIRFLAALRVGEFGVEQLNLAIAEKLRQKRLLQFHQEREWYIGKPIMV
TQNDGNVGLYNGDIGMYLGNGRVWFEQGQNSYKTVLASRVPNHETAFVMTVHKSQGSEFP
HTFLILPLENSPVLSKELVYTGVTRTKDFLTVFALQSVWESAVKNPVQRQSGLGQLLEI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttagctctattatcccaactcaaagaaaaaggcattatcaacgccgccgactattat
tttgccgagtttattcaccgcaaacagcaaccttttcaatatgcttcttccattcagaat
ctggcggtattgatggcggcgttgtgcaatttcagttatcgccaaggcaacacctgtatt
ttgctgaatcaatctacggaacaagatttattcggcttgcaggattatttcaacgagcgt
gtttacttaacggaaattcagcaaaaaattgattatgtgcccattgcgcagtggcagacg
aaattgctagacgcccaacacattgcctttagtgccgaaccgttaaaacaaattgcgccg
ttggtgttgcagtttgatcgcttgtatttttatcgcatctggcaggatgaattccgtatc
gctgattactttaaaagtgcggttcgttttcaacatgtttttttagctgaacagatagcg
caaatcgccccgattttgaaccgctattttcatgaagaacagggcatcgactggcaaaaa
attgcggtggcgatggcgttacgtcaacgattttgcctcatcaccggcgggccaggcacg
ggcaaaaccactaccgtcaccaaactgttattgaccttgcaagagcttcatcaaaacagc
ttgcgcattaaacttgtcgctccgactgggaaagcggcggcacggcttacggaatccatt
gtggacgcggtaggtcgcctgaaacaaactttttcgacggagaaacacgaacgggaaatc
atcgaaaatctgcgtattcccatgaacgcggaaacccttcatcgcttgcttggcgtgcgt
tttttcagtgaagaaacccgctattatgccgacaatcctttgccggtggatatgttggtg
gtggacgaagcgtctatgatcgatttaaccttgatggcgaagctgctcaatgcccttaaa
ccggaaaccaaattgattttattgggtgataaagatcaactggcttctgtagaagccggg
gcgattttgggcgaattagggcgtttcgtgaatgcgtcggcgccgacgtatagcctcgca
atggcacaatatttacaggagacaacgggcatttctcttgctgcgtcggaacgtggtaat
cctatcagcgacagcatttgttatttgcaggtcagccgccgtttcggggcaaatccggaa
gtgggtgcgttggcggctgcggtgaattcaggcaacgcggcggaaagctggcagttattg
cagcaatatcagcaacatcaagcaaaaaaatgcggcgtatatttaactgattttgctcgt
tatttgaccaacaaagaagatagtcagcaacgtaaaacctgtgtgaagctcatcgtggaa
cgtgcggcagaggaatatcgtcgttatttgcagttgatttcacaagaagggcagatggat
gaagaaaaagtgcggtcgattttcgcggcgtttaacggcattcgttttttagcggcgttg
cgtgtgggcgaattcggcgtggagcaattaaatctcgccatcgcagaaaagttgcgccaa
aaacgcctgttacaatttcatcaggaacgggaatggtacatcggcaaaccgattatggtg
acgcaaaatgatggcaatgtgggcttgtataacggtgacatcggcatgtatttgggaaac
ggacgggtatggttcgagcagggacaaaatagttataaaaccgtgctggcaagtcgtgtg
ccgaatcatgaaaccgcattcgtaatgacggtacacaaatcacaaggttcggaattcccg
catacttttctgattttgccgctggaaaacagccccgtgttatccaaagaactagtttac
accggcgttacccgcaccaaagattttttaacggtgttcgcgctacaaagcgtatgggaa
agcgcggtgaaaaatccagtgcaacggcaaagcggattaggtcaattactggaaatataa
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