Aggregatibacter aphrophilus NJ8700: NT05HA_0980
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Entry
NT05HA_0980 CDS
T00929
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aap03016
]
NT05HA_0980
Enzymes [BR:
aap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NT05HA_0980
Transfer RNA biogenesis [BR:
aap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NT05HA_0980
Prokaryotic type
NT05HA_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ACS97355
LinkDB
All DBs
Position
complement(1006798..1007718)
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AA seq
306 aa
AA seq
DB search
MSKPRKRGRDIHGVFLLDKPQGMSSNDIMQKVKRIFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYLVTAKLGERTDTSDAEGQIVETREVKVKTPEILTALEQFRGDIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELNFIEYNAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTMLRRTAVADYPTEKMLDWNALQSLAAQQDLALLDALLLPMDT
AVAKLPTLTLDESQAQGIGFGQRVKFNNPNSLQGQVRLFSHENRFLGVAVIDENNVIRPQ
RLVVYE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccgcgtaaacgtgggcgtgatattcacggcgtgtttttgttggataagccg
caaggtatgtcttccaatgacatcatgcagaaagtgaaacgtatttttcaggcgaacaaa
gcaggacataccggtgcgttagatccgctggctaccggaatgttgcctatttgtttgggc
gaagccaccaagttttcgcagttcttgttggatgccgataaacgttatttagtcacggca
aaactgggagaacgcacggacacatccgatgcggaaggacagattgtcgaaacccgtgaa
gtgaaggttaaaacacctgaaattttgaccgcacttgaacaatttcgtggggatattttg
caagtgccgacgatgttttcggcgttgaaacacaatggtaaaccgctttatgaatacgcc
cgtcaaggtattacggtggagcgggaagcgcgtcccattacgatctttgaactgaacttc
atcgaatacaatgcaccttatttaactcttgaggtgcattgttccaaaggcacttacatt
cgcactttggtggatgatttgggtgaggtattgggctgtggcgcccatgtaacgatgttg
cgtcgcacagcagtggcggattatccgacagaaaaaatgttggattggaatgccttacaa
agcctggcagcacagcaagatttggctttattagatgctttattattgccgatggatact
gccgtggcgaagttgccgacgttaaccttagatgaaagccaagcgcaaggcatcggattt
ggtcaacgggtaaaattcaataatcctaacagtctacaaggacaagtgcggttattttcc
cacgagaatcgctttcttggggttgcggtgattgatgagaataacgtgatccgtccacag
cgattagtggtgtatgaatag
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