Aggregatibacter aphrophilus NJ8700: NT05HA_1086
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Entry
NT05HA_1086 CDS
T00929
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03420
Nucleotide excision repair
aap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NT05HA_1086
03430 Mismatch repair
NT05HA_1086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_1086
Enzymes [BR:
aap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NT05HA_1086
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT05HA_1086
MMR (mismatch excision repair)
Other MMR factors
NT05HA_1086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ACS97452
LinkDB
All DBs
Position
complement(1097784..1099958)
Genome browser
AA seq
724 aa
AA seq
DB search
MDFAELLDGLNDKQREAVSAPLGNYLVLAGAGSGKTRVLTHRIAWLIGVEGVSEGSIMAV
TFTNKAAAEMRHRIESVLSDGNQRLFGMWVGTFHSIAHRLLRAHHLDADLPQDFQILDSE
DQLRLLKRLMKLHHFDEKSFPPKQAAWYINNKKDEGLRPNQIDDHHDRQEREWIRIYQIY
QDACDRAGLVDFAEILLRSYELFLHKPLILQRYQQRFQHILVDEFQDTNKIQYEWIRLLA
GKTGKVMIVGDDDQSIYGWRGAKIENIQLFLKEFDNAHTIRLEQNYRSTMNILQAANELI
SNNNNRLGKNLWSEGNQGDPVGIYAAFNELDEALFVASQIKTWIEDGGKLNDCAILYRSN
SQSRVIEEALIRSQIPYRIYGGMRFFERQEIKDALAYLRLIANRQDDAAFERVINTPPRG
IGERTLDTLRNLTREHQITLWQATNLALQENKLAGRAATALLRFMELINSLQRDTEEMPL
FAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVSAAREFIKPEEAEDMTELTAFLTH
ASLEAGEEQAAPHQACVEMMTLHSAKGLEFPRVFMIGVEEGLFPSFRSFEEAGRLEEERR
LAYVGITRAKQKLTISYAESRRLYGKEERHLPSRFITELPQQCLQEIRLRGTVTRALNQA
KVGSVSPITNESEWKMGQKVKHEKFGFGTVINVEGADNNLRLQIAFQNQGIKWLIAYLAK
LEKI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgcagaattattagatggtttaaacgataaacaacgggaagcggtgagtgcg
ccgttgggcaattatttggtgttggcaggcgcagggagtggtaaaacccgcgtattgacg
caccgaatcgcatggttgattggcgttgaaggtgtctccgaagggagcattatggcggtg
accttcaccaacaaagctgccgcagaaatgcgtcatcgtattgaatccgtcttgtccgac
ggcaatcagcgtttgtttggtatgtgggtcggcacctttcacagcattgctcatcgactt
ctgcgtgcccatcatcttgatgcggatttgccgcaagatttccagattttagattcggaa
gaccaattgcgtttactcaaacgcctcatgaaattacatcattttgacgaaaaaagtttc
ccgccaaaacaagccgcctggtatatcaacaataaaaaggacgaaggcttgcgtccgaat
caaattgatgatcatcacgatcgtcaagaacgagaatggattcgaatttatcagatttat
caagatgcttgcgatcgtgcagggctggtggattttgccgaaattttattgcgctcgtac
gaattgtttttacataagccactgattttgcaacgttaccaacaacgttttcagcatatt
ttggtggatgagtttcaagacaccaacaaaattcaatatgaatggattcgtttgttggcg
ggcaaaaccggcaaagtgatgattgtaggggatgacgaccaatctatttacggctggcgc
ggtgcaaaaatcgaaaatattcagttatttttaaaagaatttgacaatgcacacaccatt
cgattagagcaaaattaccgttcaaccatgaatattttgcaggcggcgaatgagttaatt
tccaataacaacaaccgactagggaaaaatttgtggtcggaaggaaatcaaggcgatcct
gtaggcatttatgccgcctttaacgaattggatgaagcgctgtttgttgcctcgcaaatt
aagacttggattgaagacggcggcaaactcaacgattgtgccattttatatcgcagtaac
agtcaatcacgggtgattgaagaagcgttaattcgttcacaaattccgtatcgtatttat
ggtggcatgcgcttcttcgaacgtcaggaaattaaggatgcgttggcatatttgcgctta
attgctaatcgccaagatgatgccgcctttgagcgcgttattaatacaccgccacggggc
attggcgagcgcacattggataccttgcgtaatctgactcgcgaacaccaaatcacgtta
tggcaagccaccaatttggcattgcaggaaaataaactggcaggtcgtgccgcgaccgct
ttgcttcgctttatggaattaattaattccttgcaacgggatacggaagaaatgccgttg
tttgcacaaacggattttgtcattaagcattccggtttgtatgaaatgtataaacaggaa
aagggcgaaaaaggcgaagtgcgtattgaaaacttggaagagttggtctctgccgcccgc
gaatttatcaagcctgaagaggcggaagacatgacagagcttacggctttcttgacgcat
gcctcattagaagcgggcgaagaacaagcagcaccgcatcaagcctgtgtggaaatgatg
accttgcactcggcaaaaggcttggagtttcctcgggtgtttatgattggcgtggaagaa
ggattattcccaagtttccgttcttttgaagaagccgggcgtttggaagaagaacgtcgt
ttggcttatgtggggattacccgcgccaaacaaaaactcaccatttcttatgcggaaagt
cgtcgtttatatggcaaagaagaacgccatttgccttcccgttttatcacggaattacca
caacaatgtttgcaggaaatccgtttacgtggcaccgttacacgcgccttgaatcaagct
aaagtaggcagtgtttcgccgattaccaatgaaagcgaatggaaaatggggcaaaaagtg
aaacatgaaaaattcggttttggtacggtgattaatgtagaaggtgcggacaataatttg
cgcttacaaatcgcgttccagaatcaaggaattaaatggctgatcgcctatttggcgaag
ttggagaaaatataa
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