Aggregatibacter aphrophilus NJ8700: NT05HA_1334
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Entry
NT05HA_1334 CDS
T00929
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NT05HA_1334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_1334
Enzymes [BR:
aap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NT05HA_1334
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NT05HA_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACS97691
LinkDB
All DBs
Position
complement(1348521..1351898)
Genome browser
AA seq
1125 aa
AA seq
DB search
MFTVYHSNQLEVQKSILVELIQRQPLSNSLQSEIVLVQSPGMAQWLQLQIAEQKGIAANF
AFPMPASFIWQLYADNLPDVSQSNQFNKNAMMWRLIRLIPAYLHQPDFQPLRHYLAHSAQ
SEQFKLYQLAGKIADLFDQYLVYRPDWISAWEEHRDVEICQQIESQLSVDNDRLLAQIQQ
NIAWQGVLWRALVQMVKTDTGLDLVQHRAHLHRLLLEKLRENRPLFLPERLFIFGIPALP
KAYLEIFQAISQYCDVHLFFNNPCEEYWGDIVDPTFIEKLALRRRTDYRNQQEKPLLSAE
QVELVQQQWDVTYDQEKLQVGNPLLASWGKLGRDFSYLLTQLEPQEISAYVEIAPRNLLS
QLHHQILHLMPSGTEPLNYVENDRSLTFHSCHSVMREVETLQNYLLHLFQTEPNLTPKDI
IVMVADIDKYTPYIQAIFGQNSVPNSAIPFSISDNKLSENDVLIAGFLALLQLKESTFSA
EDVLAFLDIPAIRERFAIELQDLAQIRDWVKNAGVRFGLEKNADGETNYNSWQAGLERML
LGYALREENGIWQDSLGLDNSFGLKGQLVGRLSEFIERLFAWYQTLQHSFNIMQWQQHLT
ALADDFFAVTTETNETLFYIKDVIQQFAEQLQDVHFEQPLVIDVVADVMNSALEENPNHY
RFLAGKVNFCTLLPMRSIPFKVVCLLGMNDDEYPRQQQANSFDLMQYHRIKGDRARRDDD
RYLFLEALLSAQEYLYISYIGRSISDNQEREPSVLVSQLLDYIVENLPDEDNDWRALLVQ
QHGMTAFSRKNFEKNDRTFSQSFAQQWLPLANSQAGRILQDFIQPMDFDAWEDERDIEFS
RLVAFVKNPVKFFFERRLGVNFSEQEESIADSENFALDNALEKYAIHAELVEFDGDQTNA
FFARQKVKGVLPRGEFATLYANQLLAETNAFKEKIDDYVSQTPHSLFAQLAVPTKNGEIT
LAGNVDRLYGEPSQRVTWRMATVKDKDRIEAWLYHLLLCATEPQPTESIFQGKDKREIFH
VVLQPEAVAQLQIYVESYLAGYAQLQLIPTTGIDAYLELISNESAVDVEQCFARLTKIAE
GDDYSRGDLYWQRVLVQTQKLDLNWINQQVKAWFAPMLQAIKREK
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaccgtttatcattccaatcagcttgaggtgcaaaaaagcattttggttgagtta
attcaacgtcaaccgctgagtaattcactccaatcggaaatcgttttagtgcaaagcccg
ggcatggcgcaatggttacaattgcaaatagccgagcaaaaaggcattgcggcgaatttt
gctttcccgatgcccgccagttttatttggcagctttatgccgacaatttacctgatgtc
tctcaaagcaaccaattcaacaaaaatgccatgatgtggcgcttaattcgcttgattcct
gcctatttacaccaacctgatttccaaccattacggcattatttggcgcattccgcgcag
tcggaacagtttaaactctaccaattagcagggaaaatcgccgatttattcgaccaatat
ttagtttaccgccccgattggattagcgcttgggaagagcatcgggatgttgaaatttgc
caacaaatcgaaagccaattaagcgttgataatgatcgtttactggcgcagattcaacag
aacattgcatggcagggcgtattgtggcgcgctttggtgcaaatggtaaaaacggatacc
gggttggatttggtacaacaccgcgcccatttacaccggttactgttagaaaaactccgc
gaaaatcgaccgctctttttacccgagcgcttattcattttcggtattcctgccttgcca
aaagcctatttggaaatatttcaggcgattagccaatattgtgatgtgcatttgttcttc
aataatccttgcgaggaatattggggtgatattgtggatccgacatttatagaaaaatta
gcgttgcgtcggcgcaccgattatcgcaatcagcaggaaaaaccgttactgtcggcggag
caagttgagcttgtgcagcaacaatgggatgtgacttacgatcaggaaaaattacaggta
gggaacccattattggcttcatggggaaaattgggacgggatttttcttatttattgaca
cagttggaaccgcaggaaatttcagcttatgtagagattgcaccgcgtaatttattatca
caattacaccatcagattctgcatttaatgccaagtggcaccgaaccgttaaattatgtg
gaaaatgaccgctctttaaccttccattcttgccatagcgtgatgcgcgaggtggaaacc
ttacaaaattatttattgcatttgttccaaacggagccaaaccttacgccgaaagatatt
atcgtgatggtggcggatattgacaaatacacgccctatattcaggcgatctttgggcaa
aacagtgtaccaaacagcgccattccgttttctatttccgataacaaattatcggaaaat
gatgtgctgattgccgggttcttggcattgctacagctaaaagaaagtacattcagtgcg
gaagatgtattggcatttttggatattccggcaattcgtgaacgttttgccattgaattg
caggatcttgctcaaattcgtgattgggtaaaaaatgcgggcgtgcgtttcgggttggag
aaaaatgccgacggcgaaaccaattataattcatggcaggcgggcttagagcgaatgttg
cttggttatgcgttgcgtgaggaaaacggcatttggcaggatagccttgggttagataac
agttttgggttgaaagggcagttagtcgggcgattgtcggaatttatagaacgcttgttt
gcgtggtatcaaaccttacagcattccttcaacatcatgcagtggcaacagcatttaacg
gcattggcagatgatttttttgcggtcacaaccgaaaccaatgaaaccttgttttatata
aaagacgtgattcaacaatttgccgaacagttgcaggacgtgcattttgagcaaccttta
gtcattgatgttgtggcagatgtgatgaatagtgctttggaagaaaacccaaatcactat
cgctttttggcgggcaaagtgaatttttgcaccttattacccatgcgttctattccgttc
aaagtggtgtgtttgttagggatgaatgatgatgagtatcctcgccaacaacaagccaat
agttttgatttaatgcaatatcatcgcatcaaaggtgatcgtgcacgccgtgatgacgat
cgttatttgttccttgaagcactgctgtctgcgcaggaatatttgtatatcagttacatt
gggcgttccatttctgataatcaagaacgtgagccctccgtattggtgagccagttattg
gattacatcgtggaaaatctgccggatgaagacaacgattggcgggcattactggtgcaa
caacatggcatgacggcattcagtcgaaaaaactttgaaaaaaacgaccgcacttttagc
caatcttttgcgcaacaatggctaccgttagccaattcacaagccggtcgaatcttgcaa
gattttattcaacccatggatttcgatgcttgggaagacgaacgcgacattgaattttcc
cgtttggtggcttttgtaaaaaatccggtgaaatttttctttgagcgtcgtcttggcgtg
aatttttccgaacaggaagaaagcattgccgatagcgaaaattttgctttggataacgcc
ttggaaaaatacgctattcatgcggaattggtggagtttgatggcgaccaaacaaatgcg
ttttttgcccgccaaaaagtgaaaggtgtgctgccacgcggtgagtttgccacgttgtat
gccaatcaattattggcggaaacgaacgcatttaaagagaaaattgacgattatgtgtcg
caaactccgcatagtctttttgcccaattggcggtgccgaccaaaaacggtgaaattacc
ttggcaggtaacgtggatcgcctgtatggcgaaccttcacagcgggtaacttggcgtatg
gcgacagtgaaagacaaagatcgcattgaggcatggctgtatcatctattgttatgcgct
acggagccgcagccgacggaatccatttttcaaggcaaggacaaacgcgagatctttcat
gtagtgcttcagccggaggccgttgcgcaactgcaaatttatgtcgaaagctatttagcc
ggatacgcacaattacagctgattccgacaacgggcattgacgcgtatttggaactgatt
tccaatgaaagtgcggtcgatgttgaacaatgttttgcgcggctaaccaaaattgccgaa
ggtgatgattattcccgtggcgatttatattggcaacgcgtgttggtgcaaactcagaaa
ttagatttgaattggataaatcagcaggtgaaagcgtggtttgcaccgatgttgcaagca
attaagagggaaaaatag
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