Aggregatibacter aphrophilus NJ8700: NT05HA_1500
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Entry
NT05HA_1500 CDS
T00929
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT05HA_1500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aap03019
]
NT05HA_1500
Enzymes [BR:
aap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NT05HA_1500
Messenger RNA biogenesis [BR:
aap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NT05HA_1500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ACS97839
LinkDB
All DBs
Position
complement(1504074..1505375)
Genome browser
AA seq
433 aa
AA seq
DB search
MLCLALIFYDEFMTMQENYLSSARFADLPLHPLVLQALTTKGFDFCTPIQALSLPVTLQG
KDVAGQAQTGTGKTIAFLTALFHHLLTHPTETDKNQPRALVLAPTRELAVQIEHDAQIFL
KTTQFKTALAYGGDGYDKQLKAIENGVDVLIGTTGRVIDYVKQGIIRLDRIQVVVLDEAD
RMFDLGFIRDIRYLLRKCPSPQQRLTMLFSATLSYKVRELAFEDMNDPEYVEIAPEQKTG
RQIKEELFYPSNQDKIRLLLTLLEEEWPERCIIFANTKHQCEEIWGYLAADGHRVGLLTG
DVAQKKRLSLLKQFTDGELDILVATDVAARGLHIAEVTHVFNYDLPDDREDYVHRIGRTG
RAGESGISISFACEQYAMNLPAIEEYIGHSIPVSQYDPNALLQDIPKPYRIKRATSTHRI
SNNNRRKPFQGKR
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgctatgcttagcgctgattttttatgatgaatttatgactatgcaagagaattattta
agttcggcacgttttgccgatttacctttacatcctttggtgctacaagcactaacaacg
aaaggatttgatttttgtaccccaattcaggcgttatccttgccggtgacattacaaggc
aaagatgtggcgggacaggcacaaaccggcaccggaaaaacaatcgcgtttttaaccgca
ctttttcaccatttattaacccatccaactgaaaccgataaaaatcaaccgcgcgctttg
gtgcttgcgccaacccgtgagctggccgtgcaaattgagcatgatgcgcagattttctta
aaaacaactcaatttaagaccgcacttgcttacggtggtgatggttatgataagcagctt
aaagctattgagaacggggttgatgtgcttattggtaccacagggcgggtgattgattat
gtaaaacaaggcattatccgtttggatcgtattcaagtggtggtgttggatgaagcggat
cgaatgttcgatttaggctttattcgtgatatccgttatttattgcgcaaatgcccgtcc
ccacaacagcgcttgaccatgttgttctccgcgaccttgtcttacaaagtgcgtgaattg
gcatttgaggatatgaacgatcccgagtatgtggaaattgcgccggagcaaaaaaccggc
cgacaaattaaagaagaactgttttatccgtctaatcaagacaaaatccgcttattattg
acgttattggaagaggaatggccggagcgttgcattatcttcgccaataccaaacatcaa
tgtgaggaaatttggggctatttggcagcggacggacatcgtgtaggtttgttgaccggt
gatgtggcacagaaaaaacgcctttctttgttaaaacaatttaccgacggtgaattggat
attttagtggcaacagacgtggcggcgcgtggtttgcacattgcggaagtgacgcatgtc
tttaactacgacttgcctgatgatcgggaagattatgtgcatcgtatcggacgtaccggc
cgtgcgggggaaagcgggatttccatcagctttgcttgtgagcaatatgccatgaattta
ccggctattgaagaatatattgggcatagcattccggtgagtcaatatgatccgaatgcg
ttgttacaggacattcctaagccttatcgaataaaacgcgccacaagtactcaccgtata
agcaacaataatcgtcgtaaaccgtttcaaggtaagcgataa
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