Aggregatibacter aphrophilus NJ8700: NT05HA_1903
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Entry
NT05HA_1903 CDS
T00929
Name
(GenBank) DNA polymerase I (POL I)
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aap
Aggregatibacter aphrophilus NJ8700
Pathway
aap03030
DNA replication
aap03410
Base excision repair
aap03420
Nucleotide excision repair
aap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NT05HA_1903
03410 Base excision repair
NT05HA_1903
03420 Nucleotide excision repair
NT05HA_1903
03440 Homologous recombination
NT05HA_1903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aap03032
]
NT05HA_1903
03400 DNA repair and recombination proteins [BR:
aap03400
]
NT05HA_1903
Enzymes [BR:
aap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NT05HA_1903
DNA replication proteins [BR:
aap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NT05HA_1903
DNA repair and recombination proteins [BR:
aap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NT05HA_1903
NER (nucleotide excision repair)
GGR (global genome repair) factors
NT05HA_1903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACS98227
LinkDB
All DBs
Position
complement(1891057..1894014)
Genome browser
AA seq
985 aa
AA seq
DB search
MDQDLSFLLWLHPLKVRWFFPAILTVYSLTIFHAQPPNFRYNAATFYQHNEIIMAQIAAN
PLVLVDGSSYLYRAFHAFPPLTNSAGEPTGAMYGVLNMLKSLISQVQPSHIAVVFDAKGK
TFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIRALGIPLLVVEGVEADDVIGTLACQASQ
SGQKVLISTGDKDMTQLVDDNIMLINTMNNSLLDRAGVIEKYGIPPELIIDYLALMGDSS
DNIPGVSGVGEKTALGLLQGIGSMAQIYANLDKVAELPIRGAKKLGEKLLAEKDMADLSY
ALATIKTDVALEFSPQDLPLGDSNNDALIEYFGRYEFKRWLGEVMNGTNSVTQPTQSVKI
NHYQATPAVKTDESAVENSVKFKIDRSRYENILTETDLTHWVEKLSAEKLIAVDTETDGL
DYMSANLVGVSFALENGEAAYLPLHLDYLGAPKTLEKSTALAALKPILENPNIGKVGQNL
KFDMTIFARNGIELRGIEFDTMLLSYTLDSTGRHNMDDLAKRYLGHQTIGFEDIAGKGKN
QLTFNQIPLEQAGEYAAEDADVTMKLQQVLWEKLKSQPSLVELYQSIELPLLGVLSRMER
CGVLIDSDALFLQSNEITERLTALEMQAHELAGQPFNLASTKQLQEILFDKLGLPVLQKT
PKGAPSTNEEVLEELAYSHELPKVLVEHRGLSKLKSTYTDKLPQMVNPQTGRVHTSYHQA
VTATGRLSSSDPNLQNIPIRNEEGRRIRQAFIARDGYKIIAADYSQIELRIMAHLSNDAG
LINAFAQGKDIHRSTAAELFGLPLEQVTSEQRRNAKAINFGLIYGMSSFGLSRQLGISRA
DAQRYMDLYFQRYPGVQTFMHDIREKAKAQGYVETLFGRRLYLPEINSSNAMRRKGAERV
AINAPMQGTAADIIKRAMIKLDEITRDDPDIHMIMQVHDELVFEVRSEKIAFFSDLIKQH
MEAAAELVVPLIVDVGVGENWDEAH
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagatctttcgtttcttttatggctccatccccttaaagtgcggtggtttttc
ccagcaattttaactgtttattcactgaccatttttcatgcgcagccccccaattttcgc
tataatgcggcaacgttttatcaacataatgagattattatggcccaaattgctgcaaat
cctcttgtcctagtagacggttcttcttatttataccgcgcctttcacgccttccctccg
ttaaccaattctgccggtgaaccgacaggcgccatgtatggtgtgttgaatatgctgaaa
agcttgatttcacaggttcagccaagtcacattgcggtggtgtttgatgccaaaggcaaa
accttccgcgatgaaatgtttgagcaatataaatctcaccgtccgccgatgccggacgat
ctgcgtaaacaaatccagccgttgcatgacatgatccgtgcgttgggtattccgctgttg
gtggtggagggtgtcgaagcggacgatgtaatcggcaccttggcctgccaggcatcgcaa
agtgggcagaaggtgctgatcagtacgggcgacaaggacatgacacagctggtagatgac
aacattatgttgattaataccatgaacaacagcctgctggatcgcgcgggagtgattgaa
aaatacggcattccgccggaactgattattgattatctggcgttgatgggcgacagttcc
gataacattccgggcgtatcaggcgtaggtgaaaaaacagcattagggcttttacagggc
atcggcagcatggcacaaatttatgccaatctggataaagtcgctgagctgccgattcgt
ggcgcgaagaaactcggtgaaaaattgcttgccgaaaaagacatggcagatttgtcctac
gcgttggcaaccatcaaaaccgacgtagcattagaattttccccacaagatctccccctc
ggcgatagcaataatgatgcattaatcgaatatttcgggcggtatgaatttaaacgctgg
ctaggcgaggtgatgaacggcactaattctgtaacgcaaccgacgcaatcggtgaaaatt
aaccattatcaagctacgccggcagtcaaaaccgatgaaagtgcagttgaaaactccgtt
aaatttaagatcgaccgcagccgctatgaaaatattctgactgaaacagatttaactcat
tgggtggaaaaattaagtgccgagaaactgattgcggtggatacggaaaccgacgggttg
gattatatgtccgccaatttggtcggcgtatcttttgcgttggaaaatggcgaagcggcg
tatttaccgttgcatttggattatctcggtgcgccaaaaacgttggaaaaaagcaccgca
cttgccgctctcaaaccaattttagagaacccgaatatcggtaaagtcgggcagaatctc
aagtttgatatgactattttcgcccgtaacggcattgaattacggggcattgaatttgac
accatgttgctttcttacaccttggacagcaccggtcgacacaacatggatgacttagcg
aagcgttatctcggacatcaaaccatcggctttgaagacattgccggcaaaggaaaaaat
cagctgacgttcaatcaaatcccgctggaacaagctggcgaatacgcggcggaagatgcc
gacgtgaccatgaaattgcaacaagtgttgtgggaaaaacttaagtcgcaaccgagttta
gtggaactctatcagtccatcgaattgccgttgctcggcgtattgtcgcgcatggagcgt
tgtggtgtgttgattgattctgatgcgctgttcttgcaatccaatgaaattaccgaaaga
ttgaccgcacttgaaatgcaggcgcacgaactggcggggcaaccattcaatttggcatcc
acgaaacagttgcaagaaattctgttcgataaactcggcttgccggtgttgcaaaaaacc
ccgaaaggcgcgccatccaccaatgaagaagtgttggaagaactggcgtacagtcacgaa
ttgccgaaagtgttggtggaacatcgtggtttgagcaaactgaaatccacttacaccgac
aaattgccgcaaatggtgaacccacaaaccgggcgcgtgcacacctcttatcatcaagcc
gtgacggcaaccgggcggctttcttccagtgatccgaatttgcagaatattccgattcgt
aacgaggaagggcgccgcattcgccaagcctttattgcccgcgacggttataaaattatt
gccgccgactattcccaaatcgagctgcgcattatggcgcatttgtctaacgacgcaggt
ttgattaacgcgtttgcgcaaggtaaagacattcaccgctctacagccgctgaacttttt
ggtttgccgttggaacaggtaacgagcgaacaacgccgcaacgctaaagccattaacttc
ggtctgatttatggcatgtcttctttcgggctttcccgtcagcttgggatttctcgagcg
gatgcgcaacgttacatggatttgtatttccaacgttacccgggcgtgcaaacctttatg
cacgacatccgtgagaaggcgaaagcgcaaggctatgtggaaaccctatttggccgccgt
ttgtatttgccggaaatcaattcttccaacgccatgcgtcgtaaaggtgcggaacgggtg
gcgattaacgcgccgatgcaaggtaccgccgccgacatcatcaaacgcgccatgattaag
ctagatgaaattacgcgcgatgatccggatattcacatgatcatgcaggtgcacgatgaa
ttggtgtttgaagtgcggtcagaaaaaattgcgtttttcagtgatctcatcaaacaacac
atggaagctgccgccgaacttgtggtaccgctgattgtggatgtcggcgtgggcgagaat
tgggacgaagcccactaa
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