Arsenophonus apicola aApi_AU: QG404_02525
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Entry
QG404_02525 CDS
T09031
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aapc
Arsenophonus apicola aApi_AU
Pathway
aapc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aapc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QG404_02525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aapc03019
]
QG404_02525
03009 Ribosome biogenesis [BR:
aapc03009
]
QG404_02525
Enzymes [BR:
aapc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QG404_02525
Messenger RNA biogenesis [BR:
aapc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QG404_02525
Ribosome biogenesis [BR:
aapc03009
]
Prokaryotic type
rRNA helicases
QG404_02525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
DRTGG
Motif
Other DBs
NCBI-ProteinID:
WGO83814
LinkDB
All DBs
Position
285690..287522
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AA seq
610 aa
AA seq
DB search
MTNETEISFANLGLSTPILSALNDLGYEKPSPIQQQCIPYLLDGCDVLGMAQTGSGKTAA
FSLPLLHNIDITLKSPQILVLAPTRELAVQVAEAMGEFSKHMRSVNVVALYGGQRYDSQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSHLRGLVLDEADEMLRMGFIEDVENIMSQIPS
EHQTALFSATMPEAIRRITRRFMKSPKEISIQSSVTTRPDITQSYWSVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERSGYNSSALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRAILFVDNRERRLLRN
IERTMKQPISEVELPSAAVLSERRQAKFAENIQKQLESGDLEKYRALLTKLVANDELDME
TLASALLKMAQGDRPLILPPDPVRRAKREFNSRDERRRSNSNGTSERSPRRERRDVGDME
LYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLFASHSTIELPKGMPNELLNHLTR
TRILNKPMQMQLLGEAQPFERRGNGQRNGGELRERGRRFGNERRSEREQFRGRNEGHNNA
GLRRRSNHNI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgactaatgagactgaaatctcttttgctaatttaggtttatcaacaccaattctttct
gcactaaatgaccttggttatgaaaaaccatcgccaatccagcagcaatgtatcccctat
ttattagatgggtgtgacgtattaggtatggcacaaaccggtagtggtaaaacagcagct
tttagtttaccgctcttacataatatagatatcacattgaaatccccacaaatcttagtg
ttggcaccaacgcgggagttagccgtacaagttgcggaagccatgggtgaattttccaaa
cacatgcgttcagtcaatgtggtcgcactctatggtgggcagcgttacgattcgcagtta
cgcgcactaagacaaggcccacaaattgtagtgggaacaccaggtcgcttattagatcac
ttgaaacgagggacattaaatttatcccatttacgtggtttggttcttgatgaagcggat
gaaatgttacgtatggggtttattgaagacgttgaaaatatcatgagccagatcccaagt
gagcatcaaacggcgctgttttctgccaccatgccggaagcgatccgtcgtattacccgt
cgctttatgaaatcaccaaaagagatcagcattcaatccagtgtgacgacgcgtccagac
attacccaaagttactggtctgtctatggtatgcgtaaaaatgaagcattggttcgtttt
ttggaagcagaagattttgatgcggcaattatttttgtgcgcactaaaaatgccacatta
gaggttgctgaagcgcttgaacgtagtggttataatagttcagcgctaaatggcgatatg
aatcaagcgctacgtgagcaaacattagagcgtttgaaagatggtcgccttgatatatta
attgccactgatgtggcagcacgtggtctagatgttgaacgtattagtttagttgtcaat
tatgacataccgatggatgccgagtcttatgtgcatcgaattggtcgtactggtcgggca
ggccgagctgggcgcgctattttgtttgtggataatcgtgaacgtcgactattacgtaat
atagaacgtaccatgaagcagccaattagcgaagttgagttaccaagtgcggcggtttta
agtgagcgtcgccaagctaaatttgctgaaaatattcaaaagcaattagaaagtggtgat
ttagagaaatatcgtgcattactgactaaattagttgctaatgatgaactggatatggaa
actttagcttctgcgctattaaaaatggcgcaaggtgatcggccgttaatattgccacct
gatcctgttcgtcgtgcaaaacgtgaatttaattcgcgtgatgagcgtcgtcgcagtaat
agtaatggtacttcggagcgtagtccgcgtcgtgagcgtcgtgatgttggtgatatggaa
ttgtaccgtattgaagttggtcgtgatgatggcgtagaagttcgccacattgtcggtgca
attgctaacgaagcggatattagtagtcgttatattggtaatattaagttgtttgcctcg
cactcaacgatagagttaccaaaaggaatgccaaatgaactacttaatcatttgacacgt
acacgtattttgaataagccaatgcaaatgcaattgttaggtgaagcgcaaccatttgaa
cgtcgcggtaatggacaacgcaatggtggtgaattacgtgagcgaggacgtcgctttggt
aacgaacgtcgtagtgagcgtgaacagttccgtggacgtaatgaaggacataataacgct
ggattacgtcgtcgtagtaatcacaatatctaa
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