Arsenophonus apicola aApi_AU: QG404_08355
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Entry
QG404_08355 CDS
T09031
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aapc
Arsenophonus apicola aApi_AU
Brite
KEGG Orthology (KO) [BR:
aapc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aapc03016
]
QG404_08355
Enzymes [BR:
aapc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
QG404_08355
Transfer RNA biogenesis [BR:
aapc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QG404_08355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
WGO82408
UniProt:
A0ABY8NYT7
LinkDB
All DBs
Position
complement(1599579..1601525)
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AA seq
648 aa
AA seq
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MFQDNPLLAQLKQQLHAQTPRVEGIVKSTEKGFGFLEVDGTKTYFIPPPQMKKVMHGDRI
IAAIHTNKDREIVEPEQLVEPFLTRFVGRIQKRNNDNRLYVKPDHPILKENIFCRPAQYL
KHDFAHNDWVIAEIRRHPLKNQGGFQAEITQYITCGDDHFAPWWVTLSRHQLEREAPKMQ
SCTIEEQTTERQDLTHLNFITIDSASTEDMDDALYIERIDDDQLRLFVAIADPTCYIPVN
SELDTIAQQRGYTNYLPGFNIPMLPRELSDDLCSLRPNERRPALVCQFDIKQDGQLAENI
QFCLAWIESKNKLVYDDVSDWLEQQDKLQVENEIIKQQILLLNEMCEKRSSWRLAHALVF
KDRPDYRFVLDENGHVINILAEKRRIANRIVEEAMIAANLCATKVLKDKLGIGIFNVHNG
FDSSQIDNVIAILQESDIEQDAETLLTLEGFCRLRRLLDSQPTQFIDSRIRRFQGFAEIK
TTPAAHYGLGFDAYATWTSPIRKYTDIINHRLLKAIINNEQHHVEKPSETLMAKITDRKR
ANRLAERDVGDWLYARFLKPFAKTNTIFAAEIIDITRGGLRIRLTDNGANAFIPAPFIHS
VREEMQCSQEIGAILIKGVAVYKLNDVINVQLEEVRMETRNIIARLVS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctagcgcagctaaaacagcaattacatgcccaaacgcct
cgtgttgaagggattgttaaaagtacagaaaaaggttttggttttcttgaggtcgatgga
acaaaaacttatttcattccaccaccacaaatgaaaaaagtgatgcatggtgatcggatt
atcgccgctattcacaccaataaagatcgcgaaatagttgaaccagagcaattggttgaa
ccctttctcacccgattcgtaggacgtattcaaaaaagaaataatgataatcggctttat
gtcaaacccgatcacccaattttaaaagagaacattttttgtcgtccggcacaatatctt
aaacatgattttgcccacaatgattgggttatagctgaaattcgtcgccatccattaaaa
aatcaaggcggctttcaagctgaaataacccaatatattacttgtggcgatgaccatttt
gccccttggtgggtgactcttagtcggcatcaattagagcgcgaagcaccaaaaatgcaa
agctgcacaattgaagagcagacaacagagcgccaagatcttactcatctcaattttatc
actattgacagtgctagcaccgaagatatggatgatgcgctttatatagagcgtattgat
gatgatcaattacgcctttttgttgccattgccgatccaacctgttatatcccagtaaat
agtgagttagataccattgcccaacaacgtggatataccaattacttacctggtttcaat
attccgatgttaccacgtgaattatcggatgatttgtgctctctgcgccctaatgagcgt
cgccccgcgctagtctgtcaatttgatattaaacaagatggacaattagccgaaaatatt
caattttgcctggcttggatcgaatcaaaaaacaagttggtatacgatgatgtttctgac
tggctggaacagcaagataaattgcaagtcgaaaatgaaataattaagcagcaaatatta
ttactcaatgaaatgtgcgaaaagcgttcatcctggcgcctagcccatgcattggtattt
aaggatcgaccagactatcgttttgtacttgatgaaaatggtcatgttattaacattttg
gcggaaaaacgtcgaattgctaatcgtatcgtcgaagaagcaatgattgccgccaatctt
tgcgcaacaaaagtattaaaagataaattaggaatcggtatttttaatgttcataatggt
tttgactctagtcaaattgataacgttattgctattttgcaagaaagtgatattgaacaa
gatgcagaaacgctattaacccttgaaggattttgtcgtttacggcgtttattagatagc
caacccactcaatttatagatagtcgaatacgccgttttcaaggttttgcagaaattaaa
accacgccggctgcccattatggtttgggatttgatgcctatgccacctggacatctcca
atccgcaagtataccgatatcatcaatcatcgtttattaaaagccataataaataatgag
caacatcatgtcgaaaaaccctctgaaactttgatggcaaaaattactgatcgcaagcgg
gctaatcgtttagctgaacgcgatgtaggtgactggttatatgcgcgttttctaaaacct
tttgcaaaaactaacaccatttttgctgctgaaataatcgatattactcgaggtgggctc
cgcattcgcttaactgataatggtgccaatgccttcattcccgcaccttttattcattcc
gtgcgggaagaaatgcagtgtagtcaagaaataggcgctatacttattaaaggtgtcgct
gtttataaacttaacgatgtgattaatgttcaacttgaagaagttcgaatggaaacccgc
aatattattgcacgactagtgtcctaa
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