Arsenophonus apicola aApi_AU: QG404_09495
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Entry
QG404_09495 CDS
T09031
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aapc
Arsenophonus apicola aApi_AU
Pathway
aapc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aapc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QG404_09495 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aapc03019
]
QG404_09495 (rhlE)
Enzymes [BR:
aapc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QG404_09495 (rhlE)
Messenger RNA biogenesis [BR:
aapc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QG404_09495 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
HI1480
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
WGO82617
LinkDB
All DBs
Position
complement(1854672..1855976)
Genome browser
AA seq
434 aa
AA seq
DB search
MCFNSLGLSDEILSAIKEVGYEKPTLIQQQAIPAILAGKDLLASAQTGTGKTAGFVLPIL
QHLNQTPVTVKGRKPVRALILAPTRELAAQVGQNVRDYSQFLRLKSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLVQQNAVSLAKVEILVLDEADRMLDMGFIHDIRRILNKLPPK
RQNLLFSATFSNQIKQLANSLLHNPTILEVAPRNSASQQVKQLIHLVDKRRKAELLSYLI
GSENWQQVLVFTRTKYGANRLTEHLIKDGIKAMAIHGNKSQGARTRALADFKSGAIRVLV
ATDIAARGLDIEQLPYVVNYELPNVAEDYVHRIGRTGRAAATGLAVSLVAIDEQSLLTAI
ERLLKQSIPRMALAGYEPDPTIKPEPIPPKKTANKKHRRHSVAKASHTNDKPIKQRTTTN
VASKTLARKNPSRG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttaactcattgggtttatctgacgagatattatcggcgattaaagaggttggc
tatgaaaagccgactttaattcagcaacaggcgatcccagcaatattagcaggaaaagat
ctgttggccagtgcacagacaggaaccggcaaaacggctggatttgttttacctatatta
caacatcttaatcagacgcctgtgactgtaaaaggcagaaaacccgtgcgggcgttgatt
ttggctccgacccgtgaattagccgctcaggttggacaaaatgtacgtgattatagccag
tttttgcgtttaaaatcgctggtggtttttggtggtgttagcattaatccacagatgatg
aaattacggggtggcgttgatattttagtggcaacacccggtcgattactcgatttggtg
cagcaaaatgccgttagtctagcaaaggttgagattttagtattggatgaagccgatcgc
atgttagatatgggatttattcatgatattcgacgaatactaaataaattaccgccaaaa
cgtcaaaatttacttttttcagccactttttctaatcaaattaaacaactggctaatagt
ttactgcataatccgaccatattggaggtggctccgcgcaattccgcctcacagcaggtt
aaacagcttatacatttggtggataagcgacgtaaagctgaattgctttcttatttaatt
ggtagcgaaaactggcagcaggtattagtttttacccgaactaaatacggagctaatcgt
ttaactgaacatctgattaaagatggaattaaggcgatggcaattcatggcaacaaaagt
caaggtgcacggacgcgggctctggcagattttaaatcaggtgcgattagagtattggta
gcaacggatattgctgctaggggattggatattgaacagctaccttatgtggtgaattac
gaattacctaatgtggcagaggattatgtgcatcgtattggacgtactgggcgcgcggca
gcaaccggtttggcggtttcactagttgctattgatgagcaaagtttattaaccgcgatt
gagcgattattaaagcagagtatcccgcgtatggcactggcaggttatgaacctgatcca
actattaagccagaacccataccgccaaaaaaaacggcaaacaaaaaacatcgacgtcat
tcggtagcaaaagcttctcatactaatgataaaccaataaaacaacggacaacgactaac
gttgctagtaaaactttagcacgaaaaaatccaagtagaggataa
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