Arsenophonus apicola aApi_AU: QG404_13225
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Entry
QG404_13225 CDS
T09031
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aapc
Arsenophonus apicola aApi_AU
Pathway
aapc02020
Two-component system
aapc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aapc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QG404_13225 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QG404_13225 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aapc03021
]
QG404_13225 (rpoN)
Transcription machinery [BR:
aapc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QG404_13225 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Tenui_NS3
Motif
Other DBs
NCBI-ProteinID:
WGO83281
LinkDB
All DBs
Position
2688041..2689480
Genome browser
AA seq
479 aa
AA seq
DB search
MKQSLQLRLSQQLAMTPQLQQAIRLLQLSTLELQHEIQQALETNPLLEQDDLYQEIETSD
INDNESAVLDSFEAIEQNEMPNELPLDTNWEEIYISDSHSKLTNNFSDNDFPLYQGETLQ
TLQDYLSWQASLTPFTEIDAAIATAIIDAIDDSGYLSTSIEDIYTGLALSDITLEEVEIV
LKRIQHFDPIGVAAKNLQDCLLIQLSALPSETPFLKEAKLIINNHLELLGNRDFRQLSRK
TKLKETALKEVIAMIQRLDPKPGQIIQTKEPHYIVPDALVRKIDNDWQVALNTENIPRLK
INQHYASLGKYSNNEEDNQFICNNLQEAKWLIKSLESRNETLLKVAQCIVENQQEFFEYG
EEHMKPMVLADIAYQVDMHESTISRVTSQKYLHSPRGIFELKYFFSSHVNTDTGGEASSI
AIRALVKKLIAAENPVKPLSDNKLTSILAEQGIQIARRTVAKYRESLSIPPSNQRKKLI
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagagtttgcaactccgactcagtcagcagttggcgatgacaccacagctacaa
caagctattcgtttgttgcaactttcaacattagaacttcaacacgaaattcagcaagca
cttgaaaccaatcctttacttgaacaagatgacctctaccaagaaatcgaaacatcagat
attaatgataacgagtcagcggtactagatagttttgaagcaattgaacaaaatgagatg
cctaacgaattgcctttagatactaactgggaagaaatttatatttcagatagtcattca
aagctaaccaataattttagcgacaatgattttcccctctatcaaggggaaacgttacaa
acattgcaagattatttatcctggcaagcatcgttaaccccctttactgaaatagatgca
gcaattgctaccgccattattgatgctatcgacgattccggctatttaagcaccagtatt
gaagatatttataccggtttagcgctaagcgatattaccctggaagaagtagaaattgta
ttaaaacggatccaacactttgatccgattggcgttgcagcaaaaaatttacaagactgc
ttacttattcagttatcagcgttacctagcgagactccttttctaaaagaagctaaacta
ataattaacaaccatttagaattactcggcaatcgtgattttcggcaacttagccggaaa
actaaattaaaagaaacggctttgaaagaagttatcgctatgatccaacgattagatcct
aaacctggacaaatcattcaaactaaagaaccacattatattgtcccagacgctctagtt
cgtaaaatagataatgactggcaagtagcccttaatactgaaaacattccacgcttaaaa
atcaatcaacattatgcttctctaggcaaatactctaataatgaagaagataaccaattc
atctgtaacaacttacaagaggcaaaatggttaataaaaagtttagaaagtcgtaatgaa
actttattaaaagttgcccaatgtattgttgaaaatcagcaagaattttttgaatatggt
gaagagcatatgaaacctatggtattagcggacattgcttatcaggttgatatgcacgaa
tcaacaatttcacgtgtcacatcgcaaaaataccttcatagtccaagaggcatttttgaa
cttaaatactttttttctagccatgttaacactgatacaggaggagaagcgtcttctatc
gctatacgcgcgctagtaaaaaaactcattgccgcagagaaccctgtaaaacccttgagt
gataacaaattaacgagcatactagcagaacagggtattcaaattgctcgtcgtactgtt
gctaaatatcgagagtctctatccattccaccctctaatcagcgtaaaaaactgatttga
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