Arsenophonus apicola aApi_AU: QG404_14015
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Entry
QG404_14015 CDS
T09031
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aapc
Arsenophonus apicola aApi_AU
Pathway
aapc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aapc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QG404_14015 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aapc03021
]
QG404_14015 (rpoB)
03400 DNA repair and recombination proteins [BR:
aapc03400
]
QG404_14015 (rpoB)
Enzymes [BR:
aapc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QG404_14015 (rpoB)
Transcription machinery [BR:
aapc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QG404_14015 (rpoB)
DNA repair and recombination proteins [BR:
aapc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QG404_14015 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
SPG4
Motif
Other DBs
NCBI-ProteinID:
WGO83418
LinkDB
All DBs
Position
complement(2845954..2849982)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFAKFIEQDLEGQNGLEAAFRSVFPIQ
SYSGNAELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFIINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRAMDYGTEEILNLFFEKTIFQIRDNKLLMT
LIPERLRGETASFDIEANGKVYIEKGRRITARHIRQLEKDKITSIEVPVEYIAGKVVAKD
YIDESTGELICTANTELSLDILARLSQGGYKTIETLFTNDLDHGAYISETLRTDPTNDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEERYDLSAVGRMKFNRSLDRDAIEGSSIL
SKQDIIDVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDALMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRLVRDGIVT
DEIHYLSAIEEGNYIIAQANTVLDDDGRFVEELITCRNKGESSLFSQDQVEYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRSDKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVALGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLRDAKKDL
TEELRIFEAGLFARIRAVLTNGGIEGDKLDKLPRERWLELSLKDEEKQNQLEQLAEQYDE
LKAEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PVEDMPYDESGNPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINTMLKQQREVAK
LREFIQKAYDLGDDPRQKVDLSTFSNEEVLRLAHNLKKGMPIATPVFDGAKEKEIKELLT
LAELPTSGQITLYDGRTGEKFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggcaaacgtccgcaa
gttttggatgttccttatcttttatctatccaacttgactcgttcgctaagtttatcgag
caagatttagaaggtcagaatgggctggaagcagcattccgttctgtatttcccattcaa
agttatagcggcaatgctgaattgcaatatgttagctatcgtcttggtgaacctgtattt
gatgttaaagaatgtcagatccgtggtgtcacttattctgctcctttacgggttaaacta
cgtctcgttatttacgagcgtgaagcaccagaaggcacagtaaaggatataaaagagcaa
gaagtttacatgggtgaaattccactcatgacagataatggtacttttattatcaatggt
acagagcgtgttattgtttctcaattacatcgcagtcctggcgtattttttgatagtgat
aaaggtaaaacgcattcttcaggtaaggtattatataatgcacgtattattccttaccgt
ggttcatggttagattttgaatttgaccctaaagataatcttttcgttcgtattgatcgc
cgtcgtaaattaccggcaaccattattctacgtgcgatggattatggtaccgaagaaatc
ctcaatctcttttttgagaagacgatttttcaaatccgtgataataagctgttaatgacg
ttaatacccgaacgtttgcgtggcgaaacagcttcttttgatattgaagccaacggtaaa
gtctatatcgaaaaaggtcgccgcattaccgcacgtcacattcgtcagctagaaaaagac
aaaatcactagtatcgaagtgcctgttgaatatattgcaggtaaagtggtagctaaagat
tatattgatgaaagtaccggcgaattgatctgtacggcgaatacagagctttctctggat
atattggcacgtctaagtcaaggtggttataaaaccattgagaccttatttactaatgac
ttagatcatggggcatatatttcagaaacattgcgtactgatccaaccaatgatcgttta
agtgctttagttgaaatttaccgtatgatgcgcccaggtgaaccacctactcgcgaagcg
gcagaaaatctgtttgagaacttattcttttctgaagagcgttacgatctttccgctgta
ggacggatgaaatttaatcgttcacttgatcgtgatgcgattgaaggctcaagcatctta
agcaaacaagatatcattgatgtgatgaaaaaactcattgatattcgtaatggtaagggt
gaagttgatgatattgaccatttaggtaaccgccgtattcgttcggttggtgaaatggct
gaaaatcaattccgagttggtttagtgcgagtagagcgtgcggttaaagagcgtttgtca
ttaggtgatttagatgcattaatgccgcaagacatgattaacgctaagcctatttctgct
gcggttaaagagttttttggctcaagtcaattatcgcagtttatggatcagaataatccg
ctctctgaaatcacccataaacgtcgtatttcagcattaggtccaggtggactaacacgt
gaacgcgctggctttgaagttcgtgacgtacacccaacccactacggacgtgtatgtccc
attgagactcctgaagggccgaatattggtttgattaactcattgtctgtctatgcgcaa
accaatgagtatggttttttggaaacaccttatcgtttagtgcgggatggtatcgtaact
gatgaaattcattatttgtcagcgattgaagaaggcaactacatcattgctcaggcgaat
actgttttagatgatgatggtcggtttgttgaagaattaatcacttgccgcaataaaggt
gaatccagcctatttagccaagatcaagtagaatatatggacgtttcaacccaacaggtt
gtgtctgttggtgcttcattaattccatttcttgagcatgatgatgctaaccgtgcattg
atgggtgcgaacatgcagcgtcaagcagtaccgacgttacgctcagataaaccactcgtt
ggaacgggtatggaacgagccgttgctgttgactctggggtaacagcagttgctaaacgt
ggtggtactgttcagtatgtagatgcttcacgtatagttatcaaagttaatgaagatgag
atgtatcctggtgaagccggcattgatatttataatctgacaaaatatacgcgttcaaat
cagaatacttgtattaatcagatgccatgtgttgcgctgggcgagccgatagagcgcggt
gatgttttggctgatggaccatcgaccgatttaggtgaattggcacttggtcaaaatatg
cgcgttgcgttcatgccctggaatggttacaactttgaagattctattttggtctctgaa
cgagtggtacaagaagatcgttttactaccattcacattcaggaattagcttgtgtatcg
cgtgatactaagttagggccagaagagattactgcagatattcctaacgtaggtgaagct
gcactatctaaattggatgaatcaggtattgtttatatcggtgccgaagtaacgggcggc
gacattctggttggtaaggtaacaccgaaaggtgaaacgcaattaacgccagaagagaaa
ttattgcgcgctatttttggtgaaaaagcttctgatgtcaaagattcttcactgcgggta
cctaatggggtatcaggaacggttattgatgtacaagtctttacacgcgatggggtagag
aaagataaacgtgcattagaaattgaagaaatgcagcttcgtgatgcgaagaaagactta
actgaagagttacgtatctttgaagccggtttatttgcccgtatcagagcagtactaact
aatggcggtattgaaggtgacaagctggataaattaccgcgtgagcgttggttagaatta
tcgttgaaggatgaagaaaaacaaaatcagttagagcaattggctgagcagtatgatgag
cttaaagctgaatttgagaagaagctagaggctaaacgtcgtaagatcactcaaggtgat
gatttagcgccaggcgtattaaaaatcgtcaaggtttatttggcagtaaaacgtcaaatt
caaccaggcgataaaatggctggtcgtcatggtaacaaaggggttatttccaaaattaac
ccagttgaagacatgccttacgatgaaagtggtaaccctgttgatatcgttttgaaccca
ctgggcgtaccatcacgtatgaatattggtcagattctggaaacccatttgggtatggct
gcgaaaggtattggcgacaagatcaataccatgctgaaacaacagcgtgaagtggctaaa
ttgagagaatttattcagaaagcttatgacttaggagatgatcctcgtcaaaaagttgat
ctcagtaccttttctaatgaagaagttctgcggttagcacataatttgaagaaaggtatg
ccaattgcaacaccagtctttgatggtgcaaaagaaaaggaaatcaaagaactattgact
ttagctgagttgccgacttctggtcagattacattgtatgatggccgtacaggcgagaaa
tttgaacgtcaggtgacagttggttatatgtatatgctgaaactgaatcatcttgttgat
gataaaatgcatgcgcgttcaacaggctcctatagtctggttactcaacaaccgttgggt
ggtaaagcacagtttggtggtcagcgttttggtgagatggaagtttgggctctggaagca
tatggcgccgcttacaccttgcaagaaatgcttaccgttaaatccgatgatgtgaacgga
cgtactaagatgtataaaaacatcgtagacggcaaccatcagatggaaccagggatgccg
gaatctttcaatgtattgttgaaagagatccgctcgttgggtattaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
