Apilactobacillus apisilvae: MOO46_00915
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Entry
MOO46_00915 CDS
T08479
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
aapi
Apilactobacillus apisilvae
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aapi03019
]
MOO46_00915
03009 Ribosome biogenesis [BR:
aapi03009
]
MOO46_00915
Enzymes [BR:
aapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MOO46_00915
Messenger RNA biogenesis [BR:
aapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOO46_00915
Ribosome biogenesis [BR:
aapi03009
]
Prokaryotic type
rRNA helicases
MOO46_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
UQS85195
LinkDB
All DBs
Position
183241..184602
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AA seq
453 aa
AA seq
DB search
MTTTFKQYNFKTFIMDALNDLGFNEPTKIQENIIPEIRKGRSVIGQSATGSGKTHAFLLP
IFDKIDPDENSVQAVITTPSRELAYQIYGNAKQLAKYSEKVIHLANYVGGTDKKRQIEKL
KNEQPQIVIGTPGRVADLIKSQHLDVHTANQLVIDEADMTMDLGFLKEVDTIAASFGKDV
QMMAFSATIPQKLSTFLKKYMTNPYVENIPNTTIINPSIDNLLISTKGENKNQLIYKLIT
MGEPYLVLIFANTKKRVEELYEFLRNQGLKVGMVSGALTPRERKRMMKQVQNLDFQFVVA
TDLAARGIDIEGVSDVINDDIPDDLEYFIHRVGRTGRNNMPGTAITLYDPDEESEIDALE
NMGISFKPKAIKNGRIVDTYDRNRRKEHRRGHDKLEPNMIGMIKKKKRNIKPGYKRKIKS
ELKRNDEMNRKIEQREEGRRKRKSRKNSSKRYR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaactacttttaaacaatataattttaagacattcattatggatgctttaaatgat
ttaggttttaatgaacctactaagattcaagaaaatattattcctgaaattagaaaggga
agaagtgtaattggtcaatctgctactggtagtggcaaaactcatgcatttcttttaccc
atttttgataagattgatccagatgaaaatagcgtccaagctgtaatcacaactccaagt
cgtgaattggcatatcaaatctatggtaatgcgaaacaacttgctaagtatagtgaaaaa
gttatccatttagcaaactatgtgggtggaactgataaaaaacgtcaaattgaaaaatta
aaaaatgaacagccacaaattgtaattggaaccccaggtcgtgttgctgatttaatcaag
agtcaacatttagatgttcatactgctaatcaattagtaattgatgaagctgatatgaca
atggacttaggttttttaaaagaagtagatactattgctgctagttttggtaaagatgtt
caaatgatggccttttctgctactattccgcaaaaattgagtacttttttgaaaaaatat
atgactaatccatatgttgaaaacattcctaatacaacgattattaatccaagtattgat
aacttattaatatcaactaaaggtgaaaataaaaatcaattaatttataaattaatcact
atgggtgaaccatatttagttttaatttttgctaatactaaaaaacgtgtagaagaattg
tatgaatttttacgcaatcagggattgaaagtaggaatggtttctggtgctttaactcca
cgtgaacgtaaaagaatgatgaaacaagttcaaaatctcgattttcaatttgtagttgct
actgatttagctgctcgtggaattgatattgaaggagtatctgatgttattaatgatgat
attccagatgatttagaatactttattcaccgtgtaggtagaactggtagaaataatatg
ccaggtacagccattactttatatgatcctgatgaagaatctgaaattgatgctttagaa
aatatgggtatttcattcaaacctaaagcaattaaaaatggtcgcattgttgatacttat
gatcgtaatcgccgtaaagagcatcgtcgtggccatgataagttagaaccaaacatgatt
ggtatgattaaaaagaaaaaacgtaatattaaaccagggtataaacgtaaaattaaaagt
gaacttaaacgaaacgacgaaatgaatcgtaagattgaacaaagagaagaaggacgtcgt
aaacgtaagtctagaaaaaatagttcaaaacgctatagataa
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