Apilactobacillus apisilvae: MOO46_02215
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Entry
MOO46_02215 CDS
T08479
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aapi
Apilactobacillus apisilvae
Pathway
aapi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOO46_02215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aapi03019
]
MOO46_02215
03400 DNA repair and recombination proteins [BR:
aapi03400
]
MOO46_02215
Enzymes [BR:
aapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOO46_02215
Messenger RNA biogenesis [BR:
aapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MOO46_02215
DNA repair and recombination proteins [BR:
aapi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MOO46_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
TniB
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
UQS85421
LinkDB
All DBs
Position
complement(432141..433583)
Genome browser
AA seq
480 aa
AA seq
DB search
MNSDLSLQEKLYYWFGFTDFRPGQLEILKYLNLGRNVFGVLPTGTGKTLIYQFFGKLINK
PIVIVSPLISLMQDQVDRMRYLGEKKTIALTSNLNFNEKKKVLNNLNKYNYIYISPEMLS
QEDVIKSFKNIDLGLFVIDEVHCIIQWGPDFRPDYLNLKNVINYLNFPQILMLTATASSK
DRSSIINILNLSNVKFVTKSVNRSNIMLSVKYCDDKEDKNNKLLSLVNKFKSPGIIYFSS
KKIANKITNLLKVKTNLNVEAYHSDLDSENRYRIQHQFMNNHLDLICATSAFGMGIDKND
IRYVIHYHMPSNIESYIQEIGRAGRDGLSSIAIILYQDNDETLQYNLLINNIPDDSMVSF
YYDNYQSLKNTVEDKLDLLKYYYDHHYSLDETKNVFKLRSFEQNNNLNAMIDYVDNHSCR
RNKLLSYFNESFDNHDDKCCDGNETILDDSELLNQHDYKKDNYIKNWHQIIDSLFNKPLN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagtgatttatctttacaagaaaagttatattattggtttggatttacagatttt
cgcccaggtcaattagaaatattaaaatatttgaatcttggaagaaatgtttttggagtt
ttaccaactggaaccggtaaaaccttgatatatcaattctttggaaaattaattaataaa
ccaattgtaattgtttcaccattaatttctttaatgcaagatcaagttgatcggatgcgt
tatttaggcgaaaaaaagactattgctttaacttctaatttaaattttaacgaaaagaaa
aaagttctaaataatttaaataaatataattatatctacatttctcctgagatgttatca
caagaagatgtcattaaatcttttaaaaatattgatttaggcctttttgttattgacgaa
gttcattgtattatccaatgggggcctgattttagaccggattatttaaatttgaaaaat
gttattaattatttgaattttccacaaattttgatgttaaccgctacagcttctagcaaa
gatagaagttcaattattaatatactgaatctttctaatgtgaaatttgttactaagtct
gtaaatcgttccaatatcatgttgtcagttaagtattgtgatgataaagaggataagaat
aataagcttttgtctttagtcaataagtttaaaagtccaggaattatttatttttccagt
aaaaaaattgctaataagattactaacttacttaaagttaaaactaatttgaatgtcgaa
gcttatcattctgatttagatagcgaaaatcgttatcgaattcaacatcagtttatgaat
aaccatttagatcttatttgtgcaactagtgcttttggcatgggaattgataaaaatgat
ataagatatgtcattcattaccacatgccttctaatatcgaatcttatattcaggaaatt
ggtcgtgctggtagagatggcctttcgagtattgctataattttatatcaagataatgat
gaaactcttcaatataatttattaataaataatattccagatgatagtatggttagtttt
tattatgataattatcaatctttaaaaaatactgttgaagataagctagacttattaaaa
tattactatgatcatcattacagtttggatgaaacaaagaatgtttttaaattaagatca
tttgaacaaaataataatttaaatgctatgatagattatgtcgataaccatagttgtcga
agaaataaattattatcttattttaatgagtcttttgataatcatgatgataaatgttgc
gatggtaatgagacgattttagatgactctgaattgctcaatcaacatgattataaaaaa
gataattatataaaaaattggcatcaaattattgattctctttttaataagccattaaat
taa
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