Apilactobacillus apisilvae: MOO46_02625
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Entry
MOO46_02625 CDS
T08479
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aapi
Apilactobacillus apisilvae
Pathway
aapi03410
Base excision repair
aapi03430
Mismatch repair
aapi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MOO46_02625 (recJ)
03430 Mismatch repair
MOO46_02625 (recJ)
03440 Homologous recombination
MOO46_02625 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapi03400
]
MOO46_02625 (recJ)
DNA repair and recombination proteins [BR:
aapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MOO46_02625 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MOO46_02625 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MOO46_02625 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UQS85499
UniProt:
A0ABY4PIB8
LinkDB
All DBs
Position
complement(520998..523310)
Genome browser
AA seq
770 aa
AA seq
DB search
MIPAKFDWKIDSSMIDENQNRISRELGIGSLITSILFSRGYKDASAIKEFLSPQLSNLRD
PYLLHDMHKACDRIKSAIQNNEKITVYGDYDADGITSTAIMYETLSNLGANVNYFVPNRF
KDGYGPNPNIYKHLISDGTNLIVTVDNGISGNDSVAIANELGCDVIVTDHHNIPDEIPDA
YAIVHARYPGDEYSFGEFSGVGIAFKVASALLEEIPEEYFDLAAIGTVADLVSLTDENRI
LVSYGLAALSDTQRPGLSKLEKLAGIKTDNLNEQSISFGIAPRLNALGRISDASTGVELL
TTFDEDLADELSHETENENKQRRKLVDDIFKQANDQAKKIADKNTIVVYGKDWHEGVVGI
VASRLIEKYHKPALVLSLNTETNILKGSGRSIERFNLFKALNGVRSNMVSFGGHSMAVGL
SVDLDNLNTVIQHLESYANENNITELQKPILKLAKKISVNQVNEQLFNQLQLLSPFGTDN
EYPIFSFEADMVTNIQTMGKNNEHLKFKILGDNSSLNVLAFKKGNLANRLEGVSDCVSVA
GHLEKNTWKGRTTIQVMLDDIFSDSVEIVDSRTNKLNKQMLNYSNSLYVFFNEKIYDKLK
SLINDSSKAALFNNLFLSDNFDNIIFVDCPNSFEDLDLALNSVNKDSNLIMYFYKKNMVM
NYAMPNRNQYADLFRFVEGHKDINLNKDINLLSNYLKIDINNLIFMLKVFKESKFISIDN
GIMNGNRNPISNDITLTNSYKKRKQQYDIEKNLLIVNNSDFNKVIRSHFD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgataccagcaaaatttgattggaaaattgattcatcaatgatagatgaaaatcaaaat
agaatttctcgagaattgggaattggctcattaataacctcaattttatttagtcgtggt
tataaagatgctagtgctattaaggaatttttaagtccacaactttctaatttaagagat
ccttacttacttcatgatatgcataaagcatgtgatcgaataaaaagtgctattcaaaat
aatgaaaagattacagtgtatggtgattatgatgctgatggaatcacaagtactgctatc
atgtatgaaacactatctaacttaggcgctaatgtgaactactttgtacctaatcgattt
aaagatggttatggtcctaatccaaatatttataaacatttaattagtgatggaactaat
ttgattgtaactgtggataatggaatttctgggaatgactcagtagcgattgcaaatgaa
ttagggtgtgatgttatagttacagatcatcataatatccctgatgaaattccagatgcc
tatgcaattgttcatgctagatatcctggggatgaatattcttttggtgaattttcaggt
gttgggattgcatttaaagttgctagtgccttattagaagaaatccctgaagaatatttt
gatttagctgcaatcggaacagttgccgatttagtgtcgttaactgatgagaatcgcatc
ttagtatcttatggattggccgctctttctgatactcaacgtccaggattaagtaaatta
gagaaattagcaggtattaaaactgataacttaaatgagcaaagtattagttttgggata
gctccaaggttaaatgctttaggaagaattagtgatgccagcacgggagttgaactgcta
actacttttgatgaagatttagcagatgaattaagccatgaaactgagaacgaaaataaa
caaagaagaaaattagttgatgatatttttaaacaagctaatgatcaagctaaaaaaata
gctgataaaaatacaattgttgtttatggtaaagattggcatgaaggtgttgttggaatt
gttgctagtcgattaattgaaaaatatcataaaccagccttggttttaagtttgaatact
gaaaccaatattttaaagggctctgggagaagcattgaaagattcaatttattcaaagct
ttaaatggtgtcagaagtaatatggtttcctttggtggtcatagtatggccgtgggatta
agtgttgatttagataacctaaacactgttattcaacacttagaaagctatgcgaacgaa
aataatataactgaattgcaaaagccaattttaaagttagctaaaaaaatatctgtcaat
caagttaatgaacaattattcaatcaattacaattattatcaccttttggaactgataat
gaatatcctatcttttcttttgaagctgatatggtaactaacattcaaacaatgggtaaa
aacaatgaacatttaaaatttaaaattctaggtgataattcttcattaaatgtattagca
tttaaaaagggtaatttagctaatcgcctagaaggtgttagcgattgcgttagtgttgca
ggacacttagaaaaaaatacttggaaaggtcggacaacaatccaagttatgttagatgat
atttttagtgacagtgtcgaaatcgttgattctaggactaataaattaaataagcagatg
ttaaattattcaaattctttatatgtattcttcaatgaaaaaatttatgataaattaaaa
tcacttattaatgatagttccaaagctgctttatttaataatttgtttttatctgataat
tttgataatataatatttgttgattgccctaattcgtttgaagatttagatttagcttta
aattctgttaataaagatagtaatttaattatgtatttttataaaaaaaatatggtcatg
aactacgcaatgcctaatagaaaccagtatgctgatctttttagatttgtggaaggtcat
aaagatataaatcttaataaagatattaacctattaagtaattatctaaaaatagatata
aataatttaatatttatgctaaaagtatttaaagaatcaaaatttatatcaatcgataat
ggcattatgaatggtaatcgtaatcctatttcaaatgatataactttaactaatagttat
aaaaaaagaaagcaacaatatgatattgaaaaaaacttacttatcgttaataatagcgat
tttaataaggttattcgtagtcattttgattag
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