Apilactobacillus apisilvae: MOO46_02680
Help
Entry
MOO46_02680 CDS
T08479
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aapi
Apilactobacillus apisilvae
Pathway
aapi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOO46_02680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aapi03019
]
MOO46_02680
Messenger RNA biogenesis [BR:
aapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOO46_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
DUF4755
Anti-Pycsar_Apyc1
Peripla_BP_4
DUF7945
P8
Motif
Other DBs
NCBI-ProteinID:
UQS85510
UniProt:
A0ABY4PIN0
LinkDB
All DBs
Position
complement(533955..535679)
Genome browser
AA seq
574 aa
AA seq
DB search
MKNNIKIIPLGGVRENGKNLYAVEINDGIYILDCGLKYPENGMLGIDVVIPDFSYLEENK
DKIVGVFLSNGQDDSIGALPYFLSDFNVPIFGSKLTIELAKNEINDNPKSKSFNDYNVID
PKSEIIFNDVTVSFFKTSYSIPDSMGIVLSTNEGQIVYTGDFKFDPALKGEYKTAYGDIA
RVGEKKVIALLSDSGNADNPFPMDNELKAERYIFNVLKDNDERIVIAANSSNILRLQQVF
NAAAESERKVYIGHDLSKKVITAIELGYLVIPKDDMIIKTAKELNELDKHEIVILETNPV
GEPIKVIQRMASQKEKSVNLIPGDVVLIVTTPSPALDNTMAKTRDMVYRADGQVKTVSDD
LNISNHASDEDLQMMMDLLNPEYVIPVNGEYMMMDASKKTAIELGIDKNNVFITNKGDVL
EYDGNKIHHGNSVDAGNTMIDGIGIGDIGNIVLRDRKVLSEDGIFIVVVTIDRKKKLIIS
KPKITSRGFIYVKTNKDLMNDASQIVSKTIQSNLDNKEFDWSHLKQAVREQISHFLFDET
KRRPVILPVIMEVNQHHRRNKHTSKKNYKNKENK
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataatataaaaatcattcctctaggtggcgttagagaaaatggtaaaaattta
tatgccgtggaaatcaatgatggaatttatattttagattgtggtttaaaatatccagaa
aatggaatgttagggatagatgttgttattcctgatttttcatatttagaggaaaataaa
gataaaattgttggtgtatttctatctaatggtcaagatgattcaattggtgcattgcct
tatttcttaagtgattttaatgtgcctatatttggatctaaattaacaattgaactagct
aagaatgaaatcaacgataatcctaaatctaagagctttaatgactataatgtaattgat
cccaaaagtgaaatcatttttaatgatgtaacagttagtttctttaaaactagttattca
attcctgattcaatggggattgttttgtcaactaatgaagggcaaattgtttataccggt
gattttaaatttgatccagcattaaaaggcgaatataaaacagcatatggagatatagct
agagttggtgaaaaaaaagtcatagctttgcttagtgattctggcaatgcagataatcca
tttccaatggacaatgaactaaaagctgaacgatatatctttaatgttttaaaagacaac
gatgaaagaattgttatagctgctaattcttctaatattctaagattacaacaagtcttt
aatgcagccgctgaatctgaaagaaaagtatatattggtcacgacttgtctaaaaaagtt
ataacggcaatagaattagggtatttagttattcctaaagacgatatgattattaaaact
gctaaagaacttaatgaattagataaacatgaaattgtaattttagaaactaatccagtt
ggtgaaccaattaaagttattcagagaatggcttcgcaaaaggaaaaaagcgttaatttg
atacccggagatgttgttttaatagttacaactccatcaccagctttggataataccatg
gccaaaactagagatatggtatatagagcggatgggcaagttaagacagtttcagatgat
ttaaatatttctaatcatgctagtgatgaagatttacaaatgatgatggatttattaaat
cctgagtatgttatccctgtgaatggtgaatatatgatgatggatgcaagtaagaaaact
gccattgaattaggaattgataaaaataatgtttttattactaacaaaggtgatgttcta
gaatatgatggtaataaaatccatcatggaaattcagttgatgctggaaatactatgatt
gatggtattggtattggagatattggtaacattgtcttaagagatcgtaaggttttatca
gaagatggtatttttattgtagttgtaacaattgatcgtaagaaaaaattgattatatct
aagcctaaaattacttctaggggattcatttatgtcaagactaataaagacttgatgaac
gatgcatctcaaattgtttctaaaacaatacaatctaatttagataacaaagaatttgac
tggagccatttaaaacaagctgttagagaacaaattagtcactttttatttgatgaaact
aaacgcagaccagttatccttccagttattatggaagttaatcaacatcatagaagaaat
aaacatacatctaaaaaaaattataaaaataaagaaaataaataa
DBGET
integrated database retrieval system
