KEGG   Apilactobacillus apisilvae: MOO46_02775
Entry
MOO46_02775       CDS       T08479                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aapi  Apilactobacillus apisilvae
Pathway
aapi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aapi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MOO46_02775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aapi03019]
    MOO46_02775
Messenger RNA biogenesis [BR:aapi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MOO46_02775
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: UQS85527
UniProt: A0ABY4PJM2
LinkDB
Position
550341..552023
AA seq 560 aa
MNKLNVKNNETAIYGVGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYQ
YLVQNKDKIKALVITHGHEDHIGGVPYLIKDLNVPIYAGPLALALIKSKLEEHGLLRTTE
LHEINPKSVLKFNKTKVSFFRTTHSIPDTIGIAVHTPSGVIVETGDYKFDLTPVTRQPPD
LQEMARLGKEGVLCLMSDSTNAERPIWTKSESWIQHAVNHIFDEETGRIIFATFASNISR
IKTACDAAIKHGKKIAVFGRSMEAAIVNGQELGYLDVPDDTFVDASELQSLPADKTLILC
TGSQGEQMAALSRIANGTHRQISIQPNDTVVFSSNPIPGNKISVDRVINELEEAGAKVIH
GKVNKIHTSGHGGQEEQKLMLSLMKPKFFMPIHGEYRMLKIHTKLAEQCGVPLKNSFIMQ
NGDVLALTKDSARIAGHFTSGDVYVDGNGIGDVGSVVLRDRQLLSEEGLVVVVATINLKD
QEIQSGPDLLSRGFVYMRESGQLLDEGRRLVFRTIRRAMRNRHANESSIRNAIIDDLQEF
LYNKTERHPLILPMLIMNKK
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgaataaactaaacgtcaaaaataatgaaactgctatttatggcgttggtggacttggc
gaaattggtaaaaacacttatggagttcaatttcaagatgaaattatattaattgatgct
ggaattaaatttcctgaagatgatttattaggtatcgattatgttattcctgattaccaa
tacttggttcaaaataaagataaaatcaaggcgttagttattactcacggacacgaagac
catattggtggtgttccatacttaataaaagacttaaatgtgccaatctacgctggtcca
ttagccctagcattaataaaaagtaaattagaagaacatggtttattaagaactactgaa
ttacatgaaataaatccaaaaagcgttctcaaatttaacaaaactaaagtgtcatttttc
agaaccactcactctattccagacacaattggaatagctgtccatacaccttctggtgta
atcgttgaaactggtgattataaatttgacttaacacctgttaccagacagccacctgat
ttgcaagaaatggcacgtctcggtaaggaaggcgttttatgtctaatgtctgatagtaca
aatgctgaacgccctatctggacaaagtctgaaagttggattcaacatgctgtaaatcat
atatttgacgaagaaactggtcgaattatattcgccactttcgcttcaaatatatcaaga
attaaaactgcttgtgatgctgcaattaaacacggcaaaaaaattgctgtatttggacgt
agtatggaagctgcgattgttaatggtcaagaattaggatacttagacgttcccgatgat
acttttgtagatgcttctgaattacagtctttacctgctgataaaacacttatattgtgt
accggatctcaaggtgaacaaatggccgctttatctagaattgctaacggaacacacaga
caaatatctatacaacctaatgatactgttgtgttttctagtaaccctattccaggtaat
aagattagtgttgatcgtgtaatcaatgaacttgaagaagctggagctaaagtaatccac
ggtaaagtaaataaaattcacacttcaggtcatggtggacaagaagaacaaaaattaatg
cttagtttaatgaagccaaaatttttcatgccaattcatggtgaatatcgaatgttaaaa
attcacacaaaactagctgagcaatgtggtgttccactaaagaatagttttattatgcaa
aacggagatgttttggcattaacaaaagattctgcaagaatagccggacattttacttct
ggagacgtatacgtcgatggaaatggaattggtgatgttggaagtgtagttcttcgtgat
cgccaattactatctgaagaaggattagtggttgtagtagcaactattaatctaaaagac
caagaaattcaatccggccctgatttgctatcaagaggatttgtttacatgcgagaatct
ggtcaactactagatgaaggtcgtagattagtatttagaactattaggagagctatgcgt
aatcgacatgccaatgaatctagtataagaaatgcgattattgatgatttacaagaattc
ttatataataagaccgaaagacatccattaattttaccgatgttaataatgaataaaaaa
tag

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