Apilactobacillus apisilvae: MOO46_02775
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Entry
MOO46_02775 CDS
T08479
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aapi
Apilactobacillus apisilvae
Pathway
aapi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOO46_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aapi03019
]
MOO46_02775
Messenger RNA biogenesis [BR:
aapi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MOO46_02775
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UQS85527
UniProt:
A0ABY4PJM2
LinkDB
All DBs
Position
550341..552023
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AA seq
560 aa
AA seq
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MNKLNVKNNETAIYGVGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDDLLGIDYVIPDYQ
YLVQNKDKIKALVITHGHEDHIGGVPYLIKDLNVPIYAGPLALALIKSKLEEHGLLRTTE
LHEINPKSVLKFNKTKVSFFRTTHSIPDTIGIAVHTPSGVIVETGDYKFDLTPVTRQPPD
LQEMARLGKEGVLCLMSDSTNAERPIWTKSESWIQHAVNHIFDEETGRIIFATFASNISR
IKTACDAAIKHGKKIAVFGRSMEAAIVNGQELGYLDVPDDTFVDASELQSLPADKTLILC
TGSQGEQMAALSRIANGTHRQISIQPNDTVVFSSNPIPGNKISVDRVINELEEAGAKVIH
GKVNKIHTSGHGGQEEQKLMLSLMKPKFFMPIHGEYRMLKIHTKLAEQCGVPLKNSFIMQ
NGDVLALTKDSARIAGHFTSGDVYVDGNGIGDVGSVVLRDRQLLSEEGLVVVVATINLKD
QEIQSGPDLLSRGFVYMRESGQLLDEGRRLVFRTIRRAMRNRHANESSIRNAIIDDLQEF
LYNKTERHPLILPMLIMNKK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactaaacgtcaaaaataatgaaactgctatttatggcgttggtggacttggc
gaaattggtaaaaacacttatggagttcaatttcaagatgaaattatattaattgatgct
ggaattaaatttcctgaagatgatttattaggtatcgattatgttattcctgattaccaa
tacttggttcaaaataaagataaaatcaaggcgttagttattactcacggacacgaagac
catattggtggtgttccatacttaataaaagacttaaatgtgccaatctacgctggtcca
ttagccctagcattaataaaaagtaaattagaagaacatggtttattaagaactactgaa
ttacatgaaataaatccaaaaagcgttctcaaatttaacaaaactaaagtgtcatttttc
agaaccactcactctattccagacacaattggaatagctgtccatacaccttctggtgta
atcgttgaaactggtgattataaatttgacttaacacctgttaccagacagccacctgat
ttgcaagaaatggcacgtctcggtaaggaaggcgttttatgtctaatgtctgatagtaca
aatgctgaacgccctatctggacaaagtctgaaagttggattcaacatgctgtaaatcat
atatttgacgaagaaactggtcgaattatattcgccactttcgcttcaaatatatcaaga
attaaaactgcttgtgatgctgcaattaaacacggcaaaaaaattgctgtatttggacgt
agtatggaagctgcgattgttaatggtcaagaattaggatacttagacgttcccgatgat
acttttgtagatgcttctgaattacagtctttacctgctgataaaacacttatattgtgt
accggatctcaaggtgaacaaatggccgctttatctagaattgctaacggaacacacaga
caaatatctatacaacctaatgatactgttgtgttttctagtaaccctattccaggtaat
aagattagtgttgatcgtgtaatcaatgaacttgaagaagctggagctaaagtaatccac
ggtaaagtaaataaaattcacacttcaggtcatggtggacaagaagaacaaaaattaatg
cttagtttaatgaagccaaaatttttcatgccaattcatggtgaatatcgaatgttaaaa
attcacacaaaactagctgagcaatgtggtgttccactaaagaatagttttattatgcaa
aacggagatgttttggcattaacaaaagattctgcaagaatagccggacattttacttct
ggagacgtatacgtcgatggaaatggaattggtgatgttggaagtgtagttcttcgtgat
cgccaattactatctgaagaaggattagtggttgtagtagcaactattaatctaaaagac
caagaaattcaatccggccctgatttgctatcaagaggatttgtttacatgcgagaatct
ggtcaactactagatgaaggtcgtagattagtatttagaactattaggagagctatgcgt
aatcgacatgccaatgaatctagtataagaaatgcgattattgatgatttacaagaattc
ttatataataagaccgaaagacatccattaattttaccgatgttaataatgaataaaaaa
tag
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