Apilactobacillus apisilvae: MOO46_03305
Help
Entry
MOO46_03305 CDS
T08479
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aapi
Apilactobacillus apisilvae
Pathway
aapi03420
Nucleotide excision repair
aapi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MOO46_03305 (pcrA)
03430 Mismatch repair
MOO46_03305 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapi03400
]
MOO46_03305 (pcrA)
Enzymes [BR:
aapi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOO46_03305 (pcrA)
DNA repair and recombination proteins [BR:
aapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOO46_03305 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MOO46_03305 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ADDB_N
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
UQS85597
LinkDB
All DBs
Position
complement(642739..644994)
Genome browser
AA seq
751 aa
AA seq
DB search
MSVNDVISGMNGKQKEAVLCTEGPLLIMAGAGSGKTRVLTHRIAYLIEEKQVLPWNILAI
TFTNKASKEMKERVSNLLDYGGNEVWISTFHALCVRILRSHIDKIGYNRAFTIAGSSEQR
TLVKRILKDLNIDPKKNDPRAILSAISNAKNDLKTPYEYQESLNHTSPFEETVGKVYTEY
QKRLHNNQALDFDDLIMMTIQLFEDVPDVLDYYQNKFHYIHVDEYQDTNEAQYKLVTMLA
KKYKNICVVGDADQSIYGWRGANMNNILNFQNDYKNANTVMLEQNYRSTKNILNAANDVI
KNNVSRKEKNLWTENKDGDKVSYYRGQSEVDEAHFVVTQIKKIIEEKNYSYNDFAILYRT
NAQSRIIEETFLKSNIPYMIVGGHKFYDRKEIQDVLAYLTLIANPSDSMSLERIINEPKR
GIGASSIEKLRVFAQENNWSMLEATKNIELNTTLSNRARTSIDQFGKMMTGLQKIAQENK
VTDVTEHILDDSGYLDNLKKSKSLESKARIENIEEFISVTQQFDNNRTEDEGDEPLTDFL
ADLALVSAQDDVDEQTPQVTLMTLHAAKGLEFPVVFLMGMEEGIFPLGRSLENEDELEEE
RRLAYVGITRAQKKLFITNAFSRMLYGRRQTNPESRFIDEISDNLIHSENNFSKNNSLKT
PFDSSRGRRMQQFSTQRAYRQPSQKVQKPKGSGADKKSWIVGDKVQHKAWGIGTVVKING
SGEDTELDIAFPDQGLKRLLAAFAPINKVEK
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagtaaatgatgtaatttcaggaatgaatggtaaacaaaaagaagccgtattatgt
actgaagggccattactaattatggctggtgctggtagtggtaaaacacgggttctaact
catcgaattgcctacttaattgaagaaaaacaggttttaccttggaatatattagcgatt
acttttactaacaaggcatctaaagaaatgaaagaacgtgtttctaatctattagactat
ggtggaaatgaagtatggatttcaacatttcacgctttatgcgttcgtattttgcgaagc
catatcgataaaattggttacaatcgtgcctttactattgcaggtagtagtgaacaaaga
acacttgttaaaagaattctaaaagacttaaatattgatcctaaaaaaaatgatccaaga
gccattttgtcggctatttccaatgctaaaaatgacttaaaaacaccttatgaataccaa
gagagtctaaaccatactagtcctttcgaggaaacagttggtaaagtttatacagaatat
caaaaacgtttacataataatcaagcactagattttgatgatttaattatgatgacaatt
caattatttgaagatgttcctgacgtccttgattactatcaaaataaatttcactacatt
cacgttgatgaataccaagatactaatgaagctcaatataaactagttacaatgttagct
aaaaaatataaaaatatttgtgtagttggtgatgctgaccaaagtatttatggttggcgt
ggagctaatatgaataatatcttgaattttcaaaatgattataaaaatgctaatactgtg
atgttagaacaaaattatcgctcaacgaaaaatattttaaatgctgcaaacgatgtgata
aaaaacaacgtttctcgcaaagaaaaaaatttatggactgaaaacaaagatggcgataag
gtttcttattatcgtgggcaaagtgaagttgatgaagcgcattttgttgtcactcaaatt
aaaaaaattattgaagagaaaaattattcatataatgattttgcaattctttatcgaacc
aatgctcaatctagaattattgaagaaacatttttgaaatctaatattccatatatgatt
gttggtggccataagttttatgaccgtaaagaaattcaagatgttttagcttatttaact
ttgattgctaatccaagcgattcgatgagtttagaaagaattattaatgagcctaaacgt
ggaattggtgcttccagtattgaaaaattaagagtttttgctcaagaaaacaattggagc
atgttagaagcaactaagaatattgaattaaatactactttatctaaccgtgcaagaacc
tcaattgatcaatttggcaaaatgatgactggacttcaaaaaattgctcaagaaaataaa
gttactgatgttacggaacacattttggatgatagtggttatttggataacttaaaaaaa
tcaaaatcattagaatctaaagctagaattgaaaatattgaagaatttatatcagtaact
caacaatttgataacaatcgtactgaagacgaaggtgacgagccgttaacggattttctt
gctgatttagctttagtttccgcacaagatgatgttgatgagcaaactccacaagtgacc
ttaatgactttacatgctgctaaaggactagaatttcctgtagtgttcttaatggggatg
gaagaaggtatttttccattaggcagatctctagaaaatgaagatgaactagaggaagaa
cgtcgtttagcatatgttggaattactagagcacaaaagaaattatttataactaatgct
ttttctagaatgttatatggtagaaggcaaactaatccagaatcacgttttattgatgaa
atttcggataatttaattcattcagaaaataatttttctaaaaataattcgttaaaaaca
ccattcgattcatcaagaggtcgtcgaatgcaacaattctcaactcaacgagcttatcga
caacctagccaaaaagttcaaaagcctaaaggtagtggagcagataaaaagtcgtggatt
gttggtgacaaagttcaacataaagcatggggtattggtactgtcgtgaaaattaatggt
agtggcgaagatacagaactagatattgcttttcctgaccaaggattaaaacgtttactt
gctgcctttgcaccaattaataaagttgaaaaataa
DBGET
integrated database retrieval system
