Apilactobacillus apisilvae: MOO46_03375
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Entry
MOO46_03375 CDS
T08479
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aapi
Apilactobacillus apisilvae
Pathway
aapi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aapi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MOO46_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aapi03021
]
MOO46_03375
03400 DNA repair and recombination proteins [BR:
aapi03400
]
MOO46_03375
Enzymes [BR:
aapi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MOO46_03375
Transcription machinery [BR:
aapi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MOO46_03375
DNA repair and recombination proteins [BR:
aapi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MOO46_03375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF961
SAM_EPH
TfoX_C
ChlamPMP_M
Motif
Other DBs
NCBI-ProteinID:
UQS85609
LinkDB
All DBs
Position
complement(653543..654493)
Genome browser
AA seq
316 aa
AA seq
DB search
MIEFEKPNIHKIDETDNYGEVVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDDVL
HEFSTVPGVVEDVTQIILNIKKLSLKLDSSDEEEKSMEINVTGPAQVTADDIQADGDVTV
LNPDLHIATVAEGSTFHMRMTANKGRGYISADENKARNDGMPIGVLPVDSIYTPIERVNY
QVENARVGQVSDYDKLTLDVWTDGSITPSEAVSLAAKILTEHLGMFVNLTDEAKNAEVMV
EKEETHKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTSKSENDMMKVRNLGRKSLVE
VMHKLEDLGLSLRKED
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaacctaatattcataagattgatgaaactgataattatggagaa
gttgttgttgaaccattagaacgtggttatggaacaactcttggaaactcgttgcgtaga
attttactttcatctttacctggtgctgctgttacaagtattcaaattgatgatgtatta
catgaattttctactgtacctggtgtagtagaagatgtaacacaaattattttgaatatt
aaaaaactttcattaaagcttgattcttctgatgaagaagaaaagtcaatggaaattaat
gttactggtcctgcacaagttactgctgatgatattcaagcagatggtgatgttactgtt
ttaaatccagatttacacattgccactgttgctgaaggttcaacattccatatgcgaatg
actgctaacaaaggccgtggatatatttctgcagatgaaaataaggctcgtaatgatgga
atgccaatcggtgtcttaccagttgattccatttataccccaatcgaacgtgttaattat
caagttgaaaatgcacgtgttggtcaagtatctgattatgataaacttactttggatgtt
tggacggatggttctatcactccaagtgaagctgtaagtttagctgctaagatactaact
gaacatcttggaatgtttgttaatttaaccgatgaagctaaaaacgctgaagtaatggtt
gaaaaagaagaaacacataaagaaaagatgttagaaatgacaattgaagaactagactta
tctgttcgttcatataattgtctaaaacgtgccggtatcaacactgttcaagaattaact
agtaaaagtgaaaatgatatgatgaaggttagaaacttaggccgcaagtctcttgttgag
gtaatgcataagttagaagatcttggattatcattacgaaaagaagattag
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