Apilactobacillus apinorum: AAPFHON13_03640
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Entry
AAPFHON13_03640 CDS
T09617
Name
(GenBank) dnaX DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aapn
Apilactobacillus apinorum
Pathway
aapn03030
DNA replication
aapn03430
Mismatch repair
aapn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAPFHON13_03640
03430 Mismatch repair
AAPFHON13_03640
03440 Homologous recombination
AAPFHON13_03640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aapn03032
]
AAPFHON13_03640
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_03640
Enzymes [BR:
aapn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAPFHON13_03640
DNA replication proteins [BR:
aapn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAPFHON13_03640
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAPFHON13_03640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_5
AAA_30
DnaX_C
AAA_22
AAA_24
AAA_19
AAA_assoc_2
TIP49
Mistic
AAA_2
FlxA
AAA_7
DUF6779
Mg_chelatase
GARP
ATRX_C
Rad17
DUF3573
SseC
Motif
Other DBs
NCBI-ProteinID:
CAI2636791
LinkDB
All DBs
Position
1:454890..456695
Genome browser
AA seq
601 aa
AA seq
DB search
MSYQALYRVWRPQRFDDVIGQDVITTTLKNAIITNQLSHAYLFAGPRGTGKTSDAKILAK
AINCPNQKDGEPCNECEICQSITNGTLNDVIEIDAASNNGVEEIRDVRDKAKYAPTQATY
KVYIIDEVHMLSTGAFNALLKTLEEPPAHVIFILATTEPQKIPATIISRVQRFDFKRITS
QDILSRMEFILNEKGIEYDDQALRVIAKSAEGGMRDALSILDQVLSFGFDKVTYDNALQV
TGSVTKSLLAQYLNNAVKHDVQAALSNVREMLDSGKDAERFIEDLIKYCQDILLYQQSPE
MVEEVELGVIDDNFKALTESIDASTIYQMIVDLNDIQNQMKYTMHPDVYLDVLTVKLAST
QAQPATNVTSASSSQNVENNVDIADNSTIRALKDQINSLQKQVEELTKNGVQVKAESSKP
VEKPKRSTNRNNARSTGKVNVTKIYPILDNATREDLNNVKNIWDELLGELDVTQRALMKV
SKPVAASHDGIVVSFEYAFLFQKASNDQKLLDDLSNGLDRILHNIPDFIFIPSDQWPEIR
KGYIVAQKNGGREVKSPNLDSSVENPGENDDNNIEKSEENSKLVKQATQLFGEEIIDVKD
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagctttataccgtgtatggagaccgcaacgttttgatgatgtgattgga
caagatgtaatcacaactacattaaagaatgcgattatcaccaatcaattgagtcatgct
tatttatttgcaggtcctaggggaactggaaaaacttccgacgctaagattttagcgaag
gcaattaattgtcctaatcaaaaagatggagaaccttgtaatgagtgtgagatttgtcaa
agcattactaatggaacattgaatgatgttatcgaaatcgatgccgcatccaataatggg
gttgaagaaattagagatgttagagacaaagcgaaatatgcaccaacacaagctacttac
aaagtttatattattgatgaagttcatatgctttctaccggagcttttaatgcacttcta
aagacattagaagaaccaccagcacatgttatcttcatcttggcaactacagaaccacaa
aagattcccgctacaattatttctcgtgttcaaagatttgatttcaaacgaatcacgtct
caagatattctatctagaatggaatttatcctgaacgaaaaaggcattgaatatgatgat
caagcacttagagtgattgcaaagtctgctgaaggtgggatgcgtgatgcgctaagtatc
ttggatcaagttttatcatttggttttgataaggtgacatatgataatgcgcttcaagta
actggaagtgtgaccaagtcactgctcgcccaatatcttaacaatgctgtaaaacatgat
gttcaagcagccttatctaatgtgcgtgaaatgttagattcaggaaaagatgcagaacgt
tttattgaagatttaattaagtattgccaagatattctgttgtatcaacaatcaccagaa
atggttgaagaagtcgaattaggggttattgatgataactttaaggcgttaacagaatca
attgatgcatcaactatctatcaaatgattgttgatttgaatgatattcaaaatcaaatg
aaatacacaatgcatccagacgtttacctagatgtgttaacagttaaattggcatctact
caagcacaaccagctactaacgttacttctgcatcaagtagtcaaaacgtagaaaacaac
gtggacatagctgataactcaacgattcgtgcgctaaaagatcaaattaattctttgcaa
aaacaagtggaggaattaactaaaaatggtgttcaagtaaaggctgaatcctctaaacca
gttgaaaagccaaaacgttcaactaatagaaacaatgctagatctactgggaaagttaat
gttaccaagatttatccaattttggataacgccaccagagaagatttgaataatgttaaa
aatatttgggatgaacttttaggagaactagacgtcacacaacgtgcacttatgaaagtt
tctaaaccagttgcagcaagtcatgacggaattgttgtctcatttgaatatgcgttctta
ttccaaaaagctagcaatgatcaaaaattacttgacgatttatccaacggactagatcgt
atattacacaatattcctgattttattttcattccttctgaccaatggccagaaattaga
aaaggttatattgtcgctcaaaagaatggtggtagagaagtaaaatcaccaaaccttgat
tctagtgttgaaaatccaggtgaaaacgatgataataatattgaaaaatcagaagaaaat
tctaaattagtaaaacaagcaacacaattattcggtgaagaaataattgatgttaaagat
gattaa
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