Apilactobacillus apinorum: AAPFHON13_06070
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Entry
AAPFHON13_06070 CDS
T09617
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aapn
Apilactobacillus apinorum
Pathway
aapn03030
DNA replication
aapn03410
Base excision repair
aapn03420
Nucleotide excision repair
aapn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAPFHON13_06070
03410 Base excision repair
AAPFHON13_06070
03420 Nucleotide excision repair
AAPFHON13_06070
03440 Homologous recombination
AAPFHON13_06070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aapn03032
]
AAPFHON13_06070
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_06070
Enzymes [BR:
aapn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAPFHON13_06070
DNA replication proteins [BR:
aapn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AAPFHON13_06070
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AAPFHON13_06070
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAPFHON13_06070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CAI2659491
LinkDB
All DBs
Position
1:686666..689314
Genome browser
AA seq
882 aa
AA seq
DB search
MSEKRLLLIDGNSITYKAFFALINQVNSFVNNEGIHTNAVFGFNNMLNIMLDKFKPTNVL
VAFDAGKTTFRTEMYADYKSGRDKTPDELREQFDYVKELLKNRGIKYYQLDNYEADDIIG
TLSKEADQLGFETTIVTGDNDLTQLCSDKTTVSISNRGVSGVVRYDTDYVKETMGITPEQ
IIDWKALKGDSSDNYSGVTGVGDKTALKLVTQFGSVENLYEHLDEVSGKKLLEHLTEDKE
NAFLAKKLATINRNAPIEITVDDTVYDGDHIKELINFYREMNFRKFLSEMSADQVETMDK
VDFVELNSDNVNDIDVKDGSNVSFYLGMDGDNYHTADYIGFALKIDETNYISRNIELLMD
DNLKALLESNKISKNVFDGKRTYVGLNRLGIKLNNVDFDLLLASYLLDTNDNSYDLGKVA
NRHDYFDVQSDEDVYGKGAKRAIPDDDILFDHFARKVNAINSLKDKLFDELKENNQVDLY
RDVELPLSFVLARMEIAGVVINKDILISMKSKISEKLLEIKQSIYNDAGEEFNIASPKQL
GEILFDKMQLPVVKKTKTGYSTAVGVLEQLAPDYPIVEKVLEYRKYSKILSTYVEGLLSD
IHVDNKVHTRYLQTLTQTGRLSSVDPNLQNIPVRTEEGRKIRQAFIPSESNWQIFSSDYS
QIELRVLASISGDKNMQDEFIHNDDIHASTARRIFGLSDNSEVTPEYRRQAKAVNFGIVY
GISDFGLSKNTGISRNDAKEFIEKYFAEYPGVKKYMEDSVNSAREKGYVETILHRRRYLP
DINAKNFNLRSFAERTAMNSPIQGSAADIIKIAMIKMEQELEKRNLKAKMLLQVHDELIF
EAPSEEIEILEELVPKVMDSAVKLNVPLNVKSHYGNSWYSLK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaaaagattattattgatcgatggaaacagtataacctataaagcgtttttc
gctttaattaaccaggttaacagtttcgttaataacgaaggtatacatactaatgcagtt
tttggttttaacaatatgttaaatatcatgctagataaatttaaaccaacaaatgttttg
gttgcttttgatgctggtaaaactacatttagaacagaaatgtatgctgattataaatct
ggacgagataagactccggatgaattaagagaacaatttgactatgtaaaagaactactt
aaaaaccgtggaattaaatattatcaattagataactacgaagccgatgatattattgga
accttatccaaggaagcagatcagctaggatttgaaacaactattgtaactggtgataat
gatttaacccaattatgttcagataaaacaactgtatccatttcaaatcgtggagtttct
ggagttgtaagatacgacactgattatgttaaagaaacaatgggaattacacctgaacaa
attattgattggaaagcgctaaagggtgattcttctgataattattctggtgtaactgga
gtcggtgataagacagcattaaaattagttactcaatttggtagtgttgaaaatctttat
gaacatttagatgaagttagtggtaaaaagttattagaacacttaactgaagataaagaa
aatgcttttttagctaaaaaattagctactatcaaccgtaatgcaccgattgaaattaca
gtagatgatactgtttatgacggcgatcatattaaagaattaatcaatttctatcgtgaa
atgaactttagaaagtttttaagcgaaatgagcgctgatcaagttgaaacaatggataaa
gttgattttgttgaattaaattctgataatgtaaatgacattgatgttaaagatgggtca
aatgtaagtttttatcttggaatggatggagataattatcacactgctgattatatcggt
ttcgcattgaaaattgacgaaactaactacatttccagaaacatcgaattattgatggat
gataatctaaaagctttacttgaaagcaataagattagtaaaaatgtatttgatggtaag
cgaacatatgtcggattaaacagactaggcatcaaattaaataatgtcgacttcgacttg
cttttggcatcttatttactagatactaacgataatagttatgatttaggaaaagtagca
aatcgtcatgattattttgatgttcaatctgatgaggacgtatatggaaaaggtgctaag
agagcaattcctgatgatgatattttgtttgatcatttcgctagaaaagttaatgctatt
aacagtctaaaagataagctatttgatgaattaaaagaaaataatcaagtagatttatat
agggatgttgaactacctttatcattcgtattggctagaatggaaattgctggagtcgtt
attaataaagatattttaatttccatgaaatctaaaatctctgaaaaattgttagaaatc
aaacaatcaatttacaatgatgctggtgaagaattcaatattgcttctcctaaacaatta
ggagaaatcctattcgacaagatgcaattaccagtagtaaagaaaactaaaacgggttat
tctactgctgtaggtgttttagaacaattggcaccagattatccaatcgtagaaaaagta
ttggaatatcgtaaatactctaaaatcctatccacttatgtagaaggattattgtcagat
attcacgttgataataaagtccatacaagatacttgcaaacacttacacaaacaggtaga
ttatcttctgttgatcctaacttacaaaacattccagttagaacagaagaaggacgtaag
attagacaagcatttatccctagtgaaagtaattggcaaattttttcatcagattattct
caaattgagctacgtgtattggcttccatttctggtgataagaatatgcaagacgaattc
attcacaatgatgatatccatgcttcaactgctagaagaatatttggtttgtcagataat
agtgaagttacaccagagtatagaagacaagctaaggcagttaacttcggaattgtgtat
ggaatttcggactttggattatctaaaaacactggaattagtagaaatgatgctaaagaa
ttcattgaaaaatattttgctgaatatccaggagttaagaaatacatggaagatagtgtc
aacagtgctagagaaaaaggatatgttgaaactatcttacatcgtcgaagatatcttcca
gatatcaatgcaaagaattttaatttaagatcatttgcagaaagaactgctatgaattca
ccaattcaaggtagcgctgctgatattattaaaattgcgatgattaaaatggaacaagaa
ctagaaaaacgtaatttaaaagctaagatgttacttcaagttcatgatgaattgattttt
gaagcacctagcgaagaaattgaaattttagaagagttggttcctaaagtaatggattct
gctgtgaaattaaatgtcccattgaacgtaaaaagtcattatgggaatagttggtacagc
ttgaaataa
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