Apilactobacillus apinorum: AAPFHON13_08040
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Entry
AAPFHON13_08040 CDS
T09617
Name
(GenBank) truB tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aapn
Apilactobacillus apinorum
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aapn03016
]
AAPFHON13_08040
Enzymes [BR:
aapn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AAPFHON13_08040
Transfer RNA biogenesis [BR:
aapn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AAPFHON13_08040
Prokaryotic type
AAPFHON13_08040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAI2677470
LinkDB
All DBs
Position
1:complement(887685..888596)
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AA seq
303 aa
AA seq
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MDGIIPLYKEKGMTSFACVSQLRGILKMKRIGHSGTLDPNVEGVLPICLGKATKLVDYLM
NSGKIYQGSITLGFDTTTEDLDGEVVSTKDVEKPLSDDEINELLESFVSEDLIQIPPMYS
AVKVNGKRLYEYARNGETVERPKRHVQIHYFKQTKECVYDEDKKQQTIFFEVGCGKGTYV
RTLAVDFGKKINMPAVMSSLTRIKSGGFNIDETFKLDDIRAAVENNKIDEIVKSIDSVLV
DFKHLELNDAQWATVKNGGFLSSDVIDTKDDKCVLSYKHAVKAIYYYDENKQVYKPEKMF
SNQ
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggatggaattatcccattatataaagaaaaaggaatgactagctttgcatgtgttagt
caattacgtggcattcttaaaatgaaaagaattggtcatagtgggacattagatcctaac
gttgaaggagttttacctatttgtttgggaaaagcaactaaattggttgattacttaatg
aactcgggaaagatatatcaaggtagtattactttaggattcgataccacaacagaagac
ttagatggagaagtggttagtactaaagatgtagaaaagccgttatctgatgatgaaatt
aatgaattgttggaaagctttgtatcggaagatttaattcaaattccaccaatgtattca
gctgttaaagtgaacggaaaaagattatatgaatatgctagaaatggtgaaacggttgaa
agaccaaagagacatgttcaaattcattattttaagcaaactaaagaatgcgtatatgat
gaagataagaagcaacaaactattttctttgaagttggttgtggaaaaggaacatatgta
agaactctagcagttgattttggtaagaaaataaacatgccagcggtaatgtctagttta
actagaattaaaagtggaggctttaatatcgatgaaacatttaaattagatgatattaga
gcagctgtagaaaataataaaattgatgaaattgtgaaatcaattgattccgtattagtt
gattttaaacatttagaattaaatgatgctcagtgggcaacggttaaaaacggtggtttt
ttatcatcagatgttattgatacaaaagatgacaaatgtgtgttaagttataagcatgct
gttaaagctatctattattatgacgaaaataaacaggtttataagcctgaaaaaatgttt
agtaatcaataa
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