Apilactobacillus apinorum: AAPFHON13_08710
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Entry
AAPFHON13_08710 CDS
T09617
Name
(GenBank) Putative uncharacterized protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aapn
Apilactobacillus apinorum
Pathway
aapn03410
Base excision repair
aapn03430
Mismatch repair
aapn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AAPFHON13_08710
03430 Mismatch repair
AAPFHON13_08710
03440 Homologous recombination
AAPFHON13_08710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_08710
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AAPFHON13_08710
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AAPFHON13_08710
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AAPFHON13_08710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAI2680159
LinkDB
All DBs
Position
1:complement(944365..946671)
Genome browser
AA seq
768 aa
AA seq
DB search
MISANFDWQYKSSEISSEAKEFAKELSINDSIVEMLIQRGYDSIGKIRDFLNPSLDQLRD
PFLLHDMKKACERINQAVENGEKITVYGDYDADGITSTSVMYETLLNIGANVEFFVPNRF
TDGYGPNPEVYKRIINEGTTLIVTVDNGISGNDAIDLANSMNCDVIITDHHQLPEKLPNA
YAIVHARYPGDEYPFGEFSGVGIAFKVATALLGELPEEYFDLAAIGTVTDIVSLTDENRV
IVKFGLKMIENTERPGLASLSKLSGLKGELNEQSIGFGLGPRLNALGRMGSARSGVELLT
TFDDVQAEELARETDEQNKKRKKFVDDISTEAIIQAQTQPDSKVIVVYGQNWHEGVVGIV
ASKLVEKFQKPSIVMNLDTTTRILKGSGRSIEGFNLFEAINGIRDELVSFGGHEMAVGLS
VEESKVDILINHLDQFAATHNLDQIAKPTLKISSVLNCSQVNAALFNQLQLLAPFGTDNE
YPIFEFKPQMVANIKTMGQDNSHLRFQMVDNGSKVNVLAFKNGSLADELSANFDDMKIAG
HLEKNTWQGRTTIQVMIDDMYSSGVQIIDKRTRVIVKEMFEPTAGYVFFNAKLFDKLNNI
INDESVACLYPDLSSIDKFDNIIVVDCPDEPGILEDLLTKISSESITFYLFKNNYIGSKG
MPNRAQYAKLFKFVMMNNDIKIHDNIKEISKKLNIDLQNLIFMINVFNELDFVFIDNGIM
NYNPDLVKSDLSNSRAYQSREKQIEVEKQLLAISREKFKQAIRICLGK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagcaaattttgattggcaatataaaagcagtgaaatatcttctgaagcaaaa
gaatttgcgaaggaattatctattaatgattctattgttgaaatgttaattcaacgaggc
tatgattccattggaaaaattagagattttttgaatcctagcttagaccaattaagggat
ccttttttgttacacgatatgaaaaaagcttgcgaacgaattaatcaagctgttgaaaat
ggtgaaaaaatcactgtttatggtgattatgatgccgatggaataacaagtacatcagtg
atgtatgaaacattacttaatattggagcaaatgttgaatttttcgtccctaatcgtttt
acagatggatatggacctaatccagaagtttataaaagaataatcaatgagggaacgact
ttgatcgttacagttgataatggaatttctggaaatgatgccattgatttagcaaattca
atgaattgtgatgttattattactgatcatcatcaattacctgaaaaacttcctaatgcg
tatgcaattgtgcatgccagatatcctggggatgaatatccatttggggaattctctggt
gtgggaatagcgtttaaagtggcaaccgctcttttaggagaacttccagaagaatacttt
gatttagcagcgattggaactgttactgatatagtttctttaactgatgaaaatagagta
attgttaagtttggtcttaaaatgattgaaaatacagaaagaccaggattagccagttta
tcaaagctttcaggtttaaaaggtgaacttaatgaacaaagtatcggatttggtttaggt
ccacgtttgaacgctttaggtagaatgggtagtgctagatctggggtagaactattaacg
acatttgatgatgttcaagcagaagaactagcaagagaaactgacgaacaaaataaaaaa
cgaaagaaatttgttgatgatattagtaccgaagcaataattcaagctcaaacacagcca
gacagtaaagtaattgttgtatatggacaaaattggcacgaaggggtagtcggaattgtt
gctagtaaactggtagaaaaattccaaaagcctagtattgtgatgaatttagatactaca
actagaattttaaaaggatctggaagaagtatcgaaggatttaatttatttgaagctatt
aacggaattagagatgaattagtttcttttggtggtcacgaaatggcggttggattaagc
gttgaagaatctaaagttgatatattgattaatcatttagatcaatttgcagcaactcat
aacttagatcaaatcgctaaaccaactctaaaaatatctagcgttttaaactgttctcaa
gttaatgcagcactatttaatcaattacagttattagcaccgtttggaacagataatgaa
tatcctatttttgaatttaaacctcaaatggtggccaatataaaaaccatgggacaagac
aatagccatttgcgttttcaaatggtagataatggcagtaaggttaatgtattagcattt
aaaaatggatccttagcagatgaattaagtgctaattttgacgacatgaagattgctgga
catttagaaaagaatacttggcagggaagaaccactattcaagttatgatagatgatatg
tacagcagtggagttcaaataatcgataaaagaacccgtgtgattgtcaaagagatgttt
gaaccaaccgccggatatgtattttttaatgcaaaattattcgataaattgaacaatatc
attaatgacgaatcagttgcatgtttataccctgatttgtcttcaattgataaatttgat
aatataatagtagttgattgtcctgatgaaccgggcattttagaagatttattaactaaa
attagtagtgaatcgataaccttttatctgtttaagaacaattatattggttcaaaaggg
atgccaaatagagcacaatatgctaaactatttaagttcgttatgatgaacaatgatatt
aaaatacatgataatatcaaagaaattagtaagaagttgaatattgatcttcaaaaccta
atattcatgattaatgtatttaatgagttagattttgttttcattgacaatggaattatg
aattataatcctgatctggtaaaaagcgatttatcaaatagtcgtgcttaccagtctcga
gaaaaacaaattgaagttgaaaagcaacttttagctattagtagggaaaagtttaaacaa
gctattcgaatttgtttgggtaaatga
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