Apilactobacillus apinorum: AAPFHON13_09050
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Entry
AAPFHON13_09050 CDS
T09617
Name
(GenBank) ATP-dependent DNA helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aapn
Apilactobacillus apinorum
Pathway
aapn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AAPFHON13_09050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_09050
Enzymes [BR:
aapn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AAPFHON13_09050
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AAPFHON13_09050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
UvrD_C
AAA_12
SLFN-g3_helicase
nSTAND3
AAA_29
AAA
DUF815
NPHP3_N
Rad17
T2SSE
TsaE
RsgA_GTPase
AAA_22
AAA_28
AAA_16
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAI2681239
LinkDB
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Position
1:complement(979363..981864)
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AA seq
833 aa
AA seq
DB search
MTESIDLFSMENNNEQNEKLFINGKVAATFFESNDSFFKVLLVKISETNISDWHEDEIVI
TGNFADIAEENEYQFFGVLVDHPKYGKQFKADNYHSTVPTSKEGLVEYLSGDNFAGVGKQ
TAKKMVDILGVNLITDVLDNESLLDKVGLSSKQRKTVIDTLQKNNGMEQVIIGLNSYGFG
SSLSSAIYNKYKGDTLKVIEENPYQLVEDIDGIGFKKADDIAKQMGMSANNPGRIRAGLI
SALQSLSLKNGDTYTQTGPILDETLKLLNNGNSENITGDDLSEQFLELAKTQKIVGEEDR
VYLKDLYDDEWRIAEHINRIIKNPNTKTFDDETIDKKIRLIEKKLNISYDESQTNALKQA
IKSQMFLLTGGPGTGKTTIIKGIIYLYAYLNDYSLDINKYKEHEFPILLAAPTGRAAKRM
QETSGIPASTIHRLLGLSGYDDNNEGTKDLEGGLLIVDEMSMVDTYLFKALMRAVPNQMK
VILVGDKDQLPSVGPGQVFTDLLRSQRINSMQLSTIYRQDSNSTIIPLAHSIQQGRLPED
FNEKQSDRSFIPCGANQMSSVIEQIVKRAKQKGFSATDIQVLSPMYRGMSGVNHLNDVIQ
EIMNPGNKEDQLEYRGIHFRLGDKVLQLVNSPEDNVFNGDIGQIIEVIHGEKSTQDKIKV
AFDQSEVTYQRKDWIQITLAYCTTIHKAQGSEFKMVILPIVPQFTKMLKKNLLYTAITRA
SDTLIMIGDYDSFLSCAQSESDNRNTSLMQRIQSLLNGEIKPSNTELLTDKKQTVETNNE
KDKPVDTNKNDQVEEKVSTEEDTDNTIKSYRLTSSLINSDQIDPMIGMEGIKP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaatcgatagatttattttcaatggaaaataataatgaacaaaatgaaaagtta
ttcataaatggaaaagttgcggctactttctttgaaagcaacgacagtttttttaaggtg
cttttagtaaaaattagcgaaaccaatatctcagattggcatgaagatgaaatcgtcatt
actggtaattttgcagatattgctgaagaaaatgaataccaatttttcggagtgttggta
gatcatccaaaatacggaaaacaatttaaagctgataattatcatagtacagtacctacc
tctaaagaaggattagttgaatatctttcaggagataactttgccggggtagggaagcaa
actgccaaaaaaatggttgatattttgggtgttaatttaattacggatgttttggataat
gaatccttactagacaaggtaggactatcaagtaagcagcgcaaaacagtaattgatacg
ctccaaaaaaataatggaatggaacaagttattattggccttaatagttatggctttgga
agtagcttatcttctgccatttataataagtataagggagacaccttaaaagtaatcgaa
gaaaacccatatcaattagttgaagatatcgatggaattggttttaagaaggctgatgat
atcgctaaacaaatggggatgtcagccaataatcctggaagaattagagcggggctaatt
tcagcactacagtcactatcattaaagaatggtgatacttatactcaaaccggaccaatt
ttagatgaaactttaaagttattaaataatggaaattcagaaaatataacaggtgatgat
ttatctgaacaatttttggagttagctaaaactcaaaagattgttggagaagaagataga
gtttatttaaaagatttatatgatgatgaatggcgaattgctgaacatatcaatcgtata
atcaaaaatccaaatacaaagacatttgatgatgaaactatcgataagaagattagattg
attgagaaaaaattaaatatttcttacgatgagtcacaaacaaatgctttaaaacaagcg
ataaaatcacaaatgttcttactaacaggtggacctggaactggaaaaacaacgattatt
aaagggattatttatttatatgcgtatttaaatgattattctttagacataaataaatat
aaagaacatgaatttccaattttactagcggcaccaacaggacgcgccgctaagagaatg
caagaaacatcagggattcctgctagtacaattcaccgattattaggtctaagtggttat
gatgataacaatgaaggcaccaaagatttagaaggtggattactaattgttgatgaaatg
tctatggttgatacctacttatttaaggcacttatgcgagcggttcctaatcaaatgaag
gttattttagtaggtgataaagatcaactaccatcagtaggaccgggacaagtattcact
gatttattaagatcacaaagaataaatagcatgcaattaagtactatttatagacaagat
agtaattctacaattattccattggcacatagcattcaacaagggcgattaccagaagat
ttcaatgaaaaacagtcagatagaagctttattccatgtggtgctaatcaaatgagttca
gtgattgaacagattgtgaaaagagctaaacaaaaaggatttagtgccactgatattcaa
gtattatcaccaatgtacagagggatgtcaggagttaatcatttgaacgatgttattcaa
gaaattatgaatcctggtaataaggaagaccaattagaatatagaggaattcattttaga
ttgggtgataaagttcttcaattagttaacagccctgaagataatgtgtttaacggtgac
attggtcaaattatagaagtcatccatggagaaaaatctacacaagataaaatcaaagtg
gcttttgatcaaagtgaggtcacataccaaagaaaagattggattcaaataacgttagca
tactgtacaacaattcataaggcacagggtagtgagttcaagatggtaattttaccaatt
gtgccacagtttactaaaatgttgaaaaagaatcttttatacactgcgattacccgtgcc
agtgatacgttaattatgattggtgactatgattcatttttaagctgtgcacaaagcgag
tctgataacagaaatacgagtttaatgcagagaattcagtcattattaaatggtgagata
aaaccatctaatactgaactattaactgataagaaacaaactgttgaaacaaataatgaa
aaagataagcctgtagatacaaataaaaatgatcaagtagaagagaaagtatctactgaa
gaagataccgataatacaattaaatcctatcgtttgacctcaagtctaatcaattcagat
caaattgatccaatgattggaatggaagggattaaaccttaa
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