Apilactobacillus apinorum: AAPFHON13_10920
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Entry
AAPFHON13_10920 CDS
T09617
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aapn
Apilactobacillus apinorum
Pathway
aapn03420
Nucleotide excision repair
aapn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAPFHON13_10920
03430 Mismatch repair
AAPFHON13_10920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_10920
Enzymes [BR:
aapn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAPFHON13_10920
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAPFHON13_10920
MMR (mismatch excision repair)
Other MMR factors
AAPFHON13_10920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
AAA_16
PhoH
DEAD
AAA_30
NACHT
NPHP3_N
PMC2NT
DUF3482
DUF5713
Motif
Other DBs
NCBI-ProteinID:
CAI2685924
LinkDB
All DBs
Position
1:complement(1132390..1134690)
Genome browser
AA seq
766 aa
AA seq
DB search
MSDSIKETEQKHLNHILSKVEVAKAEAVKKINRAEKDEHDINKNFYNDVRLKTSTYSGMM
ETSVSIRQQQQMLEERENSWKHATREYDKLQKMQERPYFARLDFEEAGENKAETIYIGLG
SFADSPDHYLIYDWRAPISSIYYDSKIGKLTYQTPMGEQTVNVTLKRQFQIKDCKIETIF
DTDQVVGDQMLLDNLNGKSNTKMKSIVTTIQREQNKIIRDTKSDLLFVQGAAGSGKTAAV
LQRVAFLLYQYRGKLSSAQVVLFSPNQLFNDYINQVLPELGEQNMVQMTYYQYSSLRVPK
FKVETLSERFEEDNSEDKYVRNINNLKNSLDFFKAETAYTNHLNTEDMKFKNLKFQGDVF
ISKEQIEEIYYSFNENYNLRNRLDATKERLIKILNRRVKSEMKKPWVEQAVQDLSREQIQ
AIQNAHPDEFENAEKEFDFLARHIVIGAFKRIRSQIVHGRFIGVNNQFVHFLRNVPNLID
LSKFNVNKEEWIQSVDDSIARMKSGHISMSDVSIYLYLFDRISGKRPKTDIRYLFIDEVQ
DYTAFQMAFMKFTFPRARFTLLGDLNQAIFTHENSHTLLTELSTMFDPEKTNVVQLTKSY
RSTEQITDFTKHILEGGSQIESFARIGDKPVMQVVDNHEAALDKLIVKINDDKQKHDTTA
IIVKTLADAVALSEQLDAKNEKNTLIQTENQRLATGTLIIPAYLAKGLEFDSVVMFDGDD
VHYGDESDRQLVYTICTRAMHELTIIAENKTSHLFDVVPTDLYDLQ
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcaattaaagaaacggaacaaaaacacttaaatcatattttaagcaaagtc
gaagttgcaaaggcggaggctgttaaaaaaataaatcgtgctgaaaaagatgaacatgat
attaataagaacttttataatgatgttcgactaaaaactagtacttattcagggatgatg
gaaacttctgtttcaattcgtcaacaacaacaaatgttggaagaaagagaaaacagttgg
aaacatgctacccgtgaatatgacaagctacaaaagatgcaagaaagaccatactttgct
cgtttagattttgaagaagcgggtgaaaataaagccgaaactatttacattggtttaggt
tcttttgcggatagtccagatcattacttaatctatgattggcgtgcgccaatttctagt
atctactatgatagtaagattggtaaattaacataccaaactccaatgggtgaacaaact
gtgaatgtgaccttaaaacgtcaattccaaattaaagattgtaagattgaaaccattttt
gatactgatcaagtcgttggggaccaaatgctattggataacctaaatggtaaatccaat
actaagatgaagagtatcgttactaccattcaaagagaacaaaataaaattattcgtgat
actaagtcagacttactattcgttcaaggggctgctggttcaggtaaaacagcagcggtt
cttcaaagagttgctttcctattgtatcaatacagaggcaagctaagttctgctcaagtg
gtattattctcacctaaccaattgtttaatgattacattaaccaagtgttgcctgaatta
ggtgaacaaaacatggttcaaatgacttactaccaatacagtagtttacgtgtacctaag
tttaaggtggaaacattatcagaacgttttgaagaagataattctgaagataagtacgtt
agaaacattaataatttaaagaactcactagatttctttaaggctgaaactgcctacact
aaccatttgaatactgaagatatgaagttcaagaaccttaaattccaaggggatgtcttc
atttctaaagaacaaatcgaagaaatttattacagtttcaatgaaaactacaacttaaga
aatagactggatgctaccaaggaaagattaatcaagattttgaaccgtcgtgttaaatct
gaaatgaagaaaccatgggtagagcaagctgttcaagacttaagtcgtgaacaaattcaa
gcaattcaaaatgctcatcctgatgaatttgaaaatgctgaaaaagaatttgatttctta
gcaagacatattgttatcggtgccttcaaacgtatcagatcacaaatcgtccatggccgt
ttcatcggggttaacaaccaatttgttcatttcttaagaaacgtaccaaacctaattgac
ttatctaagttcaacgtcaataaggaagaatggattcaatcagtcgatgattcaattgct
cgcatgaagagcggtcacatctcaatgtcagatgtttccatttatctatatctatttgac
cggatttctggtaaacgtcctaagacagatattagatatctattcattgatgaagtgcaa
gattacaccgcattccaaatggcattcatgaagttcactttcccacgtgctcgttttaca
ttattgggagacttaaaccaagctatctttactcatgaaaatagtcatactttattgact
gaactatctacaatgtttgatccagaaaagacaaacgttgtgcaattaaccaagtcatac
cgttcaactgaacaaattactgactttactaagcacatcttagaaggtggcagtcaaatc
gaatcatttgctagaattggtgataaaccagtaatgcaagtggtggataatcatgaagct
gcattagataaattaattgtaaaaattaatgatgataagcaaaaacatgatacaactgcc
ataattgttaaaactttggccgatgcagttgcattatccgaacaattagacgctaagaac
gaaaaaaatacgcttatacagaccgaaaaccaacgcttggctactggaaccctaattatc
cctgcatacctcgcaaaagggctagaatttgattctgtggttatgtttgatggggatgac
gttcattatggagatgaatcagaccgtcaattggtttacacaatctgtactcgtgcaatg
catgaattaactattatcgctgaaaacaagacaagtcacttgtttgatgtggttccaaca
gatttatatgatttacaataa
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