Apilactobacillus apinorum: AAPFHON13_13640
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Entry
AAPFHON13_13640 CDS
T09617
Name
(GenBank) addA ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aapn
Apilactobacillus apinorum
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_13640
Enzymes [BR:
aapn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAPFHON13_13640
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AAPFHON13_13640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_12
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_16
AAA_8
Motif
Other DBs
NCBI-ProteinID:
CAI2694219
LinkDB
All DBs
Position
1:complement(1405408..1409130)
Genome browser
AA seq
1240 aa
AA seq
DB search
MEYTKPQKEAVTGHFDRNVLVSASAGSGKTRVLVDRVINKLIVDGVNIDEMLIVTFTKAA
AKEMRDRIQKALREKLRDAKNNEEKAFLVRQLRRLPVADISTMDSFCQKIVQNYYYIIDL
DPNFRLLADQTESQMLKEQVWDAVREDLYSDDKDGSFAQLTDNFSNDRSDDGLTDLVFKI
YDYANVNQDPVAWLKSTVDIYDIKDADLFSSDFYQKQLLPFIQNDIQQQKLSLESAKKIA
EDNLMDKEIAALQADIEKVNGAMQLVANQPFDDARKVLNDLKFDRFPSVGKQAEDIERDL
HDRIKDIRNDAKEGMKKVVTNYFAQSEAENLAIMAASKRLIEKLVTVVLAFSDSFQNAKL
KRHCLEFIDVEHYAYTILAGMGDKSKAVRENFQSQYNEIMIDEYQDNNRLQDAILTTLAK
PEHSNMFMVGDVKQSIYRFRLADPSMFISRMEDEVNEHTIVLPDNFRSAENIDDFINLVF
TQTMDKNVGEIDYTGDAKLKAGAKYPDELESNVSVMMYESKDDEEEAVDEQFQVQDSAHG
QIEMIAQKINELMQKEMPVFDRGEGKMRPIRYSDIAIISSTRNNNLVLSDIFGSYDIPVL
ISGAQSYFKTTEIQIMMAMLSIIDNPYQDIPLVAVLRSPMVGLNENQLAYLRINSKTGDY
YNAVLNFYQNYENMDHSEFGDQVFDRIRIFMEQLKHFKDVAQQQPIVELIWDIYETTGFL
DYVGGMPAGKQRQANLHALYERAYDYEQTSFKGLFQFVRFVRRMQERNEDLDEANADDND
NAVSVMTIHGSKGLEFPVVFLMDASHNFNRQDTKKDYVLNDRLGLGITYTDPETRIKQPT
LQRQVVNSIENRGLLAEEMRKLYVALTRAEQQLFIVGATKQQNERNKVIDAWNKASSGNE
LLIDPALRSGAKSYIDWIGPALVRHPNFRNQFGDDIAYQGLNDDQTAFDVEFVNANDLAQ
KHVTGDSDTSQKWLHQIAEKAKSTSIAGINVDDINQVLSFQYPNQVATHTTAYQSVSEIK
RLFEDPDNVQLDNYQDYQDRKVKSRHTNAKLATPKFMQSVEEPKATDIGTATHLILQELS
LDQRPDETAVQSLLDRLIADNVITEPVGKLINVGEVTKVFDSKIGQEMLEHVDSLHREAP
FSMLMNANQIFEGFTEQSDEKILVHGIIDGYIELEDHVILFDYKTDKVKSNDQEKGIEKI
KDNYRGQINLYAEALTHILHKPVTDKYLYLLSINQAVKMD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggaatatacaaaaccacaaaaagaagccgttactggtcatttcgaccgcaacgtgtta
gtttctgcatctgccggttcaggtaaaacgagagtcttagtggaccgtgttatcaacaag
ttaattgttgatggggttaacatagatgaaatgttaattgttacttttaccaaagctgct
gcaaaagaaatgcgtgacagaatccaaaaggcactacgtgaaaagctccgcgatgctaag
aataatgaagaaaaagcctttttagtccgccaattaagaagattaccggtagccgatatt
tctaccatggattcgttctgtcaaaaaattgtgcaaaattactattacattattgattta
gaccctaattttagattattagctgatcaaactgaaagccaaatgttaaaagaacaagta
tgggatgcggtgcgagaagatttatattctgatgataaggatgggtcgtttgctcaatta
actgataacttttctaacgaccgttctgacgatggactaaccgatttagtttttaaaatt
tacgattacgccaacgttaatcaagacccagtcgcttggctaaaaagtactgttgatatt
tatgatattaaagatgctgatttatttagctctgatttctatcaaaaacaactattacca
tttattcaaaatgatattcaacaacaaaaattatcattagaatcagccaaaaaaattgct
gaagataatttgatggataaagaaatcgctgctttgcaagctgacattgaaaaggtgaat
ggcgcaatgcaattagtagctaatcaaccttttgatgacgctagaaaagtgctaaatgat
ttgaaatttgaccgtttcccaagtgttggtaaacaagctgaagatatcgaaagagatctt
catgaccgcatcaaagacattcgtaatgacgctaaggaaggtatgaaaaaagttgttact
aattactttgcacaaagcgaagcagaaaacttagcaattatggctgcttccaaacgttta
attgaaaaattagttacagttgtactagctttcagtgatagtttccagaatgccaaatta
aagcgtcattgccttgaatttattgatgtggaacattatgcttacaccatcttagctgga
atgggcgacaaatctaaggcggttagagagaacttccagtcacaatataacgagattatg
attgatgaatatcaagataataaccgtttacaagatgcgattctgaccactttagctaaa
cctgaacacagtaacatgttcatggtgggggatgtaaagcaatcaatttatcgtttccgt
ttagctgatccatcaatgttcattagtcgcatggaagacgaagttaatgaacatacaatc
gtcttacctgataacttccgttctgctgaaaatattgatgatttcatcaacttagttttc
acccaaactatggataaaaatgtcggcgaaattgactataccggggatgccaaactaaaa
gctggtgcaaagtaccctgatgaattggaatcaaacgtttctgtcatgatgtatgaaagc
aaggatgatgaagaagaagcagttgatgaacaattccaagtacaagatagtgcccatggc
caaattgaaatgattgcgcaaaagattaatgaattaatgcaaaaagaaatgcccgttttt
gaccgtggtgaaggtaaaatgcgtccaattcgctattctgatatcgcgattatttcatcg
actcgtaataataatttagtattatcagatatctttggatcgtatgacattccagtccta
attagtggtgcgcaaagctactttaagacgactgaaattcaaattatgatggcaatgtta
tcaattattgataatccataccaagacattccactagttgcggtgctacgttcaccaatg
gtgggactaaatgaaaatcaattagcttatttaagaattaattctaaaactggtgactat
tacaatgccgtccttaacttctaccaaaattatgaaaatatggatcatagtgaatttggt
gatcaagtatttgataggattagaatcttcatggaacaattgaaacatttcaaggatgtt
gcccaacaacaaccaatcgtggaactaatctgggatatttatgaaactactggattctta
gattatgttggtgggatgcctgctggaaaacaaagacaagccaacttacatgctttgtat
gaacgcgcttatgattatgaacaaactagtttcaaaggattattccaatttgttcgattc
gttcgtcgaatgcaagaacgtaacgaagatttagatgaagcaaatgcagatgataatgat
aacgcagtatccgtaatgacgattcatggtagtaagggactagaatttccagtcgtcttc
ttgatggacgcatctcacaactttaaccgtcaagatactaagaaagactatgtcttaaat
gaccgtttaggattgggaattacctatactgacccagaaactagaatcaagcagccaaca
ttgcaacgccaagtggtaaactcaattgaaaatcgtggattgttagctgaagaaatgaga
aagctatatgtagcgttaactcgtgcggaacaacaactatttatcgttggtgccactaag
caacaaaatgaacgtaataaggtgattgatgcctggaataaggctagtagtgggaatgaa
ctattaatcgatccagcattaagaagtggcgctaagagctatattgattggattggacca
gcattagttcgtcaccccaacttccgtaatcaatttggtgatgatatcgcataccaagga
ttgaatgacgatcaaactgcttttgatgttgaatttgtgaatgcgaatgatttagcacaa
aaacacgtgacgggagatagtgatactagccagaaatggttacatcaaattgctgaaaaa
gcgaagagtactagtattgcaggcatcaatgttgatgatattaatcaagttctatcattc
caatatcctaatcaagtagcgactcatacgactgcttatcaatcagtttctgaaattaaa
cgattgtttgaagatcctgataatgttcaattggataattaccaagattatcaagaccgt
aaagttaaaagccgtcacaccaatgcgaagttagccacacctaagttcatgcaatcagtg
gaagaacctaaggcaaccgacattgggaccgcaacgcatttgattttacaagaattatca
ttggatcaacgtccagatgaaacagcggttcaatcattattagaccgtttaattgctgat
aacgttattactgaaccagttggaaaactaattaacgttggtgaagttactaaggtcttt
gacagtaaaattggtcaagagatgttagagcacgttgattcactccatcgtgaagcacca
ttttccatgttgatgaatgccaatcaaatctttgagggcttcacagaacaatcagatgaa
aaaatattagtccatgggattattgatggttatatcgaattagaagatcatgttatctta
ttcgactacaagactgataaagttaagagtaacgaccaagaaaaagggattgaaaaaatt
aaagacaattatcgtggccaaattaatttatacgctgaagcgttaacccacatcctgcat
aaaccagttactgataagtacctatatttattatcaattaatcaagctgttaaaatggat
taa
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