Apilactobacillus apinorum: AAPFHON13_13650
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Entry
AAPFHON13_13650 CDS
T09617
Name
(GenBank) rexB ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aapn
Apilactobacillus apinorum
Brite
KEGG Orthology (KO) [BR:
aapn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapn03400
]
AAPFHON13_13650
Enzymes [BR:
aapn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAPFHON13_13650
DNA repair and recombination proteins [BR:
aapn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AAPFHON13_13650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CAI2694252
LinkDB
All DBs
Position
1:complement(1409130..1412699)
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AA seq
1189 aa
AA seq
DB search
MSLQFILGTASYDHEKVIMDSLRNAIDTKSEDEFFYIVPNHIKFESEVQALKNLNVNDDD
IYAESKFQTFSITRLVWYYMKNHPEYQKTHLSESGINMLIYQILLDHQDELTVFRGETDQ
PGFIQKIGQQIGEMQAGQISADDLKRIVDNNDKINAGLRDKMHDFIIIYRGFEEATQGKY
LYKSDVLNLFCRYIETNELDLSHSHFYFNGFNQFTAQEAKLVELLIKHAQSVTIGLNLDR
KYPDELPQGPSLFFQSAKWYHRFYNIARVNNVPVLVDQFAKQQRVSDDLLSLDQFWAQSN
ALGTIDDHQLKDNKSLQIYKADNPFAEVELIASKIRRMVAQQGYHYSDFLILTRHLDRYQ
NVLNPVFSQMEIPDFNDVSKSMADHPLVELINALFSLEDGGRKYQYQDVMRLLKTELMLP
KIDDENYLSIEDYRKYVALTENLVLKNGYEGSRWTQKDDWQYAWLSDDDFGITAQRFRDI
SEKINVIRHFIRDNFPPFFQSIKAATTGQEAAGILYQFLINMGVSDQLVNWRNQAIDDED
LVKAGQSEQVWQTFCNLLDDYVSMLGHRAFVAADFLDLLQSGFSGASYSQIPSTLDQVAI
SESGIVQMNNRKVVFMMGSTDEVMPDKVTNEALFGDADRDDLRDFFADGQYLRETSENQM
ANDPFLNYLAFLAGSEKLIFTYSLGDSDESSVQISPYVERIKNHFNLSINHIVSQPSAEM
DDITAYVGTYRSTLSHLVQASQHAKLTNANLSPAWNYIYQQLNQISDYKLLANKLLGGLD
YNNTPTPLNQEIVTGLYGEQINTSISKLEQFYSNPYEYFLRYGLKLKERDVFDLSPASTG
QFYHESMDRLMRIVNEEHIDLASIDNKTLNELVDTVVAKMLEDPNDFQYTILTSSHRMNY
IKNQLVKTVKHTINTIQKQSQYTPMRAKKTEISFGQVGRDGDLAPLSFELPKSAQLTTAK
LVNVRGRIDRIDSMNIDGTNYLSVVDYKSSERKIDFSKVFDGTSMQMMTYIDVLAHNLGI
IDEEEKAALAGAVYMHVYNPKYNRSDIKSTLEDTILKKQKYEGILVDDGKLLDKIDATIA
YDKYGTSNIFPLYKKKDGSFSKTNSIVQPDDLQLLLNHNEDLIKRAGLEIFTGNVDLSPA
KFGPNSDAMQYTPYKSIMQFDPLLNENNYREVPNYKLEDVLRNLRGEDK
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacaatttattttaggaaccgctagttacgatcatgaaaaagtgattatggac
tcattaagaaacgccattgacaccaaaagtgaagatgaatttttctatattgttcctaac
catattaagtttgaatctgaagttcaagcgttaaagaatttaaatgttaacgatgatgac
atatatgcagaaagtaaatttcaaaccttttccattacacgactagtctggtattacatg
aagaatcatccagaataccaaaaaacacatttaagtgaatctggcattaacatgttgatt
taccaaattttactagaccatcaagatgaactaaccgtctttcgtggtgaaactgatcaa
cctggttttattcaaaaaatcgggcaacaaattggtgaaatgcaagctggccaaattagc
gcagacgatttaaagagaattgttgataataacgacaaaattaatgccggccttcgcgat
aaaatgcatgattttatcattatttatcgtggctttgaagaagctacgcaaggtaagtat
ctatacaaatcagacgtattgaatcttttctgtcgatacatagaaaccaatgaactagac
ttatcacacagtcatttctactttaatggttttaaccaatttaccgcccaagaagctaag
ttagtggaactattaattaaacatgcgcagtcagtaacaattggtcttaacctagaccgc
aagtacccagatgaattgccacaggggcctagtctattctttcaatcagcaaagtggtac
caccgtttttacaatattgcacgcgtaaataatgtcccagtattagttgatcagtttgct
aagcaacaacgagttagcgatgatttactatcattggaccaattttgggctcaatcgaat
gcgttggggacaattgatgaccatcaattaaaagacaacaaatcactgcaaatctataaa
gctgataatccatttgctgaagtagaattaattgccagcaaaatcagaagaatggtggct
caacaaggttatcattattctgatttcttaatcctaactcgtcatttagaccgttaccaa
aatgttttaaacccggtatttagtcaaatggagataccggattttaatgatgtctcaaaa
tcaatggcagaccatccactagtggaattaattaacgccttatttagtttggaagacggt
ggtcgcaagtaccaatatcaagacgtcatgcgtctattgaagactgaattaatgcttccc
aaaattgatgatgaaaactatttatcaattgaagactaccgtaagtacgtggccttaacc
gaaaacttagtacttaaaaatggttatgaaggcagtcgttggacccaaaaggatgattgg
caatatgcctggttatccgatgatgactttggaattaccgcgcaacgtttccgtgatatt
tccgaaaaaattaacgtgattcgccacttcattagagataatttcccaccatttttccaa
tcaattaaagcagctacgacaggtcaagaagctgccggaattttatatcaattcttaatt
aacatgggtgtctcagaccaactagttaattggcgcaatcaagcaattgatgatgaagat
cttgttaaggcaggacaatctgaacaagtatggcaaacattctgtaatttgttagatgat
tatgtatcaatgctaggccatcgtgcatttgtggcggccgattttctagacctactacaa
agtggttttagtggtgctagttattcacaaattccatccacattggatcaagttgcgatt
tcagaaagtggaatcgttcaaatgaataaccgtaaagtcgtcttcatgatgggttccact
gacgaagtaatgccagataaggtcacaaatgaagcgttatttggtgatgctgaccgtgat
gatttaagagacttttttgccgatggccaataccttcgtgaaacctcagaaaaccaaatg
gctaatgatccgtttttgaattacttagcctttttggctggtagtgaaaagttgattttc
acatatagtttaggcgatagtgacgaatcatcagtccaaatttcgccatacgtagaacgc
attaagaaccacttcaatctatcgattaaccatattgtgagtcaaccaagtgctgaaatg
gatgacataaccgcatatgtgggaacatatcgctcaacattgagtcatttagtacaagcg
agtcaacacgctaaactcaccaatgctaatttatcacccgcttggaactatatttaccaa
caattaaaccaaatttcagactataaattacttgctaataaactattgggtggattggat
tacaacaataccccaacaccattgaatcaagaaatcgtgacaggtttatatggtgaacaa
atcaacacttcaatttccaagttggaacaattctacagtaatccatatgaatacttctta
cgctacggattaaaactaaaagaacgtgatgtctttgacttatcaccagctagtacaggt
cagttctaccatgaatctatggatagattaatgcgcatcgttaatgaagagcacattgat
ttagcaagtatcgataataaaactttgaacgaactagttgatacagtagttgctaaaatg
ctagaagaccctaacgatttccaatacacgattttaactagctcgcatcgaatgaactat
attaaaaaccaattggttaaaactgttaaacacacgattaatacgattcaaaaacaaagc
caatacacaccaatgcgtgcgaagaaaactgaaatttcctttggtcaagttggtcgtgat
ggcgatttagcaccattgagttttgaattaccaaagagtgcgcaattgaccactgctaaa
ttagtcaatgttcgtggtcgaatcgaccgcattgattcaatgaatattgatggcactaat
tacctaagtgttgttgattataaatccagtgaacgtaagattgatttctccaaagttttt
gatggcacttcaatgcaaatgatgacctatattgatgtgttagcacacaacttaggtatt
attgacgaagaagaaaaggccgctttagcaggggctgtttatatgcatgtttacaatcct
aaatacaatcgatctgatattaagtcaacgttagaagatactattttgaagaaacaaaag
tatgaaggtattttagtcgatgacggaaaactgttggataaaatcgatgctaccattgca
tacgataagtacggaacttccaacattttcccactatataagaagaaagatggtagtttc
tctaaaacgaattcaatcgtgcaacccgatgacttacaattgctgctaaatcacaatgaa
gatttaattaagcgtgcaggactagaaatttttactggaaatgttgatttaagtccggcg
aagtttggtcctaattctgatgcaatgcaatatacaccatacaaatcaatcatgcagttt
gatccattgctaaatgaaaacaactatcgtgaagtgccgaactacaagctagaagacgta
ctacgtaatttaagaggggaggataaataa
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