Apirhabdus apintestini: QNH14_05880
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Entry
QNH14_05880 CDS
T09955
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aapt
Apirhabdus apintestini
Brite
KEGG Orthology (KO) [BR:
aapt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aapt03032
]
QNH14_05880 (gyrA)
03400 DNA repair and recombination proteins [BR:
aapt03400
]
QNH14_05880 (gyrA)
Enzymes [BR:
aapt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
QNH14_05880 (gyrA)
DNA replication proteins [BR:
aapt03032
]
Prokaryotic type
DNA Topoisomerases
QNH14_05880 (gyrA)
DNA repair and recombination proteins [BR:
aapt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNH14_05880 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WPM85536
LinkDB
All DBs
Position
1121917..1124550
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AA seq
877 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPEVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMALKEILEAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAGLIAQPWALGNV
AAMLERAGDDAARPEWLEPEFGIHDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLGQIAELLHILGSAERLMEVIREELELIRDQFGDERRTEITANSADINIEDLINQENVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGINVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGNDEVMLFSALGKVVRFKEDAVRTMGRTATG
VRGIRLAEGDSVVSLIVPRGEGAILTVTQNGYGKRTSAAEYPTKSRATQGVISIKVTERN
GHVVGAVQVDDCDQIMMITDAGTLVRTRVSEVSIVGRNTQGVILIRTAEEENVVGLQRVA
EPVDEEDLDAIDGTAAEGDDEIAPETEGDDMPESDEE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaattacgccggttaacattgaggaagaactgaaaagttcc
tatctggactacgcgatgtcggtgattgttggccgtgcactgccggatgtccgtgatggc
ctcaagccggttcaccgtcgcgttctgtacgccatgaacgtattgggcaacgactggaac
aaagcttacaaaaaatcggcccgtgttgttggcgacgttatcggtaaataccatccccac
ggtgattcagccgtttacgatacgatagtgcgcatggcgcagcctttttcgctgcgctat
acgctggtagacgggcaggggaactttggttctatcgacggcgactccgcggcggcgatg
cgttataccgaaattcgtcttgcaaaaattgcccatgaattaatggccgatctcgaaaaa
gagaccgttgattttgtcgataactacgacgggacggaaaaaatcccggaagtgatgccg
acaaaaatccctaatttgctggtgaacggctcctccgggattgcggtaggtatggcgacg
aatattccgccgcacaacctgacggaagtgattaacggctgtctcgcttatattgatgat
gaaaacatcagcattgaagggctgatggagcacataccgggcccggattttcctactgcc
gctatcattaacgggcgtcgcggtattgaagaagcctaccgcaccgggcgtggcaaaatt
tacatccgcgctcgcgcagaagtagaagctgacgcgaaaaccgggcgtgaaaccattatc
gttcacgaaattccctaccaggtgaataaagcgcgattgattgaaaaaatcgccgaactg
gtcaaggacaaacgcgtagaaggcatcagcgctctacgcgacgagtctgataaagacggg
atgcgcatcgttattgaagtgaagcgcgatgcggtgggcgaggtggtgctgaataacctc
tattcccagacgcaattacaggtttctttcggtattaacatggtggcactccatcatggt
cagcccaaaattatggcgctgaaagaaattctggaagcgttcgtgcgtcaccgccgtgaa
gttgtgacgcgccgcactatttttgaattgcgtaaagcgcgcgatcgcgcgcatatcctg
gaagctttagcgatagcgcttgccaatatcgatcccattatcgagcttatccgtcgtgct
ccgacgccggcagaagcgaaagccgggctaattgcccagccgtgggcgttaggtaacgtg
gcggcgatgctggagcgtgcgggcgatgatgcagcgcgtccggagtggctggaaccagag
ttcggcattcatgacggtaaatattatcttaccgaacagcaggcgcaggctatcctggat
ttgcgtttgcaaaagctgaccggccttgagcatgaaaagctgctggacgaatataaagaa
ttgctcggacagatagccgagctgctgcatattttgggtagcgctgaacgtttgatggaa
gttattcgcgaagagctggagcttattcgcgatcagtttggcgatgagcgccgcactgaa
attactgccaatagcgctgatatcaatattgaagatctgatcaaccaggaaaacgtggtt
gtcacgctgtcgcatcagggctatgtgaagtatcagccgttgacggattacgaggcgcag
cgtcgcggcggtaaaggtaaatctgccgcgcgtatcaaagaagaagactttattgaccgg
ctactggtggcgaacacgcatgacactatcctgtgcttctccagccgcggccgcctttac
tggatgaaggtataccagcttcctgaagccagccgaggcgcgcgcgggcgtccaatcgtc
aatctgctgccgctggaagcgaacgaacgcattaccgctattctgccggtgcgtgaatac
gaagaaggtataaatgtcttcatggctaccgccagcggaacggtgaagaaaaccgcgctt
acagagtttagccgcccgcgcagcgcggggatcatcgccgttaatttgaatgaaggcgat
gagcttatcggcgtcgatttaaccgacggtaacgatgaagttatgctgttttcggcgctg
ggtaaagtcgtgcgctttaaagaagatgcggtgcgcaccatgggacgtaccgcgaccggg
gttcgaggtattcgtctggcagagggcgacagtgtggtatcactgattgtaccgcgtggc
gaaggcgctatcctgaccgttacgcagaatggttacggtaaacgcacctccgcggcagaa
tacccaaccaaatcgcgcgctactcagggcgttatctccattaaggttactgagcgaaat
ggccacgttgtgggcgccgttcaggtggatgactgcgaccagataatgatgataaccgac
gcggggacgctggtgcgcacgcgcgtttccgaggtcagtatcgttggacgtaatactcag
ggcgttatcctgatccgcactgcggaagaggaaaacgtggttgggctgcagcgcgttgca
gaaccggtggacgaagaggatctcgacgccattgacggtaccgccgcggaaggcgatgac
gaaatcgcaccggaaaccgagggggatgatatgccggagagtgacgaagagtaa
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