Apirhabdus apintestini: QNH14_06110
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Entry
QNH14_06110 CDS
T09955
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
aapt
Apirhabdus apintestini
Pathway
aapt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aapt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNH14_06110 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aapt03400
]
QNH14_06110 (nfo)
Enzymes [BR:
aapt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
QNH14_06110 (nfo)
DNA repair and recombination proteins [BR:
aapt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
QNH14_06110 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
WPM85553
LinkDB
All DBs
Position
complement(1175073..1175930)
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AA seq
285 aa
AA seq
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MKFIGAHVSASGGLENAVIRAAELNATAFALFTKNQRQWRAAPLNDETITHFKAACQQYG
YRPEQILPHDSYLINLGHPVEEALEKSRAAFIDEMQRCEQLGLTLLNFHPGSHLKQISEE
QCLARIAESINIALAQTEGVTAVIENTAGQGSNLGFRFEHLAAIIDGVDDKSRVGVCIDT
CHAFAAGYDLRTEENCAHTFAEFERIVGFRYLRGMHLNDAKSEFGSRVDRHNSLGEGNIG
HTAFRWIMRDPRFDNIPLIPETTNPDIWAEEIAWLKAQQEQNAAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattggagcgcacgttagcgcctccggcggcctggaaaacgccgtcattcgc
gcagcggaactgaacgctacagcctttgccctgttcacgaaaaatcagcgccagtggcgc
gcggcaccgctcaacgacgagacgattacgcattttaaagcggcctgccagcaatacggc
tatcggcctgagcagatcctgccgcacgacagttatttgattaatctggggcacccggtc
gaagaggcgctggaaaaatcgcgcgccgcgtttattgatgagatgcagcgctgcgaacaa
ttggggttaacgctgctgaactttcatccgggcagccacctgaaacaaatcagcgaagag
caatgtttggcgcgtatcgccgaatctatcaatatcgcgctggcgcaaaccgagggcgtg
acggcggtaatcgaaaataccgcaggccagggaagcaatcttgggttccgttttgaacat
ctggccgccattattgacggcgttgacgataaatcccgggtcggcgtttgtattgatacc
tgccacgcgttcgctgccggttacgatctgcgcaccgaggaaaactgcgcgcataccttc
gcggagtttgaacggatcgtgggctttcgctatctgcgcggcatgcacttaaacgatgca
aaaagtgaatttggcagccgcgtcgaccgccacaacagccttggtgaagggaatatcggc
cataccgcatttcgctggattatgcgcgatccgcgttttgataatattccgctgatcccg
gaaaccaccaatcccgatatctgggcggaagaaattgcctggctgaaggcccagcaggag
cagaatgccgccgcctga
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