Apirhabdus apintestini: QNH14_06715
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Entry
QNH14_06715 CDS
T09955
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
aapt
Apirhabdus apintestini
Pathway
aapt00521
Streptomycin biosynthesis
aapt00541
Biosynthesis of various nucleotide sugars
aapt01100
Metabolic pathways
aapt01110
Biosynthesis of secondary metabolites
aapt01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
aapt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QNH14_06715 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QNH14_06715 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
QNH14_06715 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QNH14_06715 (rfbB)
00525 Acarbose and validamycin biosynthesis
QNH14_06715 (rfbB)
Enzymes [BR:
aapt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
QNH14_06715 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
WPM85602
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All DBs
Position
1300261..1301325
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AA seq
354 aa
AA seq
DB search
MKIMVTGGAGFIGSAVVRELIENSDADVMVIDKLTYAGNLESLRPVSNNARFHFSHTDIC
DDASLTSLFERFQPDVVMHLAAESHVDRSIDGPDAFIKTNIVGTYRLLEASRSYWCSLPV
ERRATFRFHHISTDEVYGDLEHDSDFFREDTPYAPSSPYSASKASSDHLVRAWMRTYGLP
TIVTNCSNNYGPYHFPEKLIPLTIINALAGKTLPIYGDGSQIRDWLYVEDHARALCLVAR
QGKPGETYNIGGHNERKNRDVVKTICDLLDELNPLRPGDIRHYSELISFVTDRPGHDRRY
AIDASKIASELGWVPLETFESGIRKTVIWYLNNQGWWKHIMDGSYTGQRLGLKN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatggtgacgggcggagccggtttcattggttcggcggtagtaagagagctg
attgaaaatagcgatgccgacgttatggttatagataaacttacttacgctggcaacctg
gaatcattacggccagtatctaataatgcccgctttcatttttcgcataccgatatctgt
gatgatgcatcattaaccagtctatttgagcgttttcagccggatgtggttatgcattta
gcagcagaaagtcatgttgatcgctcaatcgatgggcccgatgcatttattaaaactaat
attgtaggaacctataggctgcttgaagcttctcgatcctattggtgctctttaccagtg
gaacgccgtgcgacgtttcgttttcatcatatttcaacggatgaagtgtatggcgatctg
gaacatgattcagacttctttcgagaagatacgccttatgcacctagcagcccttattct
gcatctaaggcttccagcgatcacctggtgcgagcctggatgcgaacctacggtttacca
acaattgtgacaaattgttcaaataactatgggccttatcattttccggaaaaattgatt
ccactgacgattattaatgcgctggctggaaaaacgcttcccatatacggagacggcagt
cagatccgagattggctttatgttgaggatcatgcaagggcgctttgtttagtggccaga
caggggaaaccgggcgaaacttataatatcggcggccataacgagcgtaaaaatagagat
gttgtaaaaactatttgtgacttattggatgagttgaatccgttaaggccaggcgatatc
aggcattacagcgaattaatttctttcgtcacagatagacctggtcatgacagacgctat
gcgatcgatgcttctaagattgccagcgaattgggttgggtgcctttagagacttttgaa
tctggtatccgcaagaccgttatttggtatcttaataatcagggatggtggaaacatatc
atggatgggtcatacacagggcaacgtttggggttaaaaaactga
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