Apirhabdus apintestini: QNH14_07780
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Entry
QNH14_07780 CDS
T09955
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aapt
Apirhabdus apintestini
Brite
KEGG Orthology (KO) [BR:
aapt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aapt03016
]
QNH14_07780 (rnd)
Enzymes [BR:
aapt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QNH14_07780 (rnd)
Transfer RNA biogenesis [BR:
aapt03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QNH14_07780 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
WPM86025
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All DBs
Position
1497955..1499073
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AA seq
372 aa
AA seq
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MNYQIITTTAQLQQVCEQARSASTVALDTEFVRTRTYYAQLGLIQLFDGTQVSLIDPLAI
EDMSALKALLQDEQVLKFLHAGSEDLDVFQHAFGVMPTPFIDTQIVAAFLGHPLSCGFAN
MVETYSGIALDKSESRTDWLARPLSEKQLAYAAADVWYLLPLARRLMDDISSSGWLAAAQ
DECALMARRRAEVVSPREAWRDIGNAWQLRTRQLGCLRLLAAWRLEEARRRDLAVNFVVR
EEHLWQVARYMPGSLGELDSLGLSGSEIRFHGKMLITLVEQAQELPESALPEPLINLIDI
PGYRSIFKSIKQVVQETAAENKLGPELIASRRQINQLLNWHWGLKAAYPEPLSGWRGELL
GEKLRAVLSALQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagataattacgacaaccgcacagttacagcaggtttgtgagcaggcgcgc
agcgcgtcaaccgttgcgttggataccgagtttgtccgtacgcgcacctattacgctcag
ctagggcttattcagctctttgacggcactcaggtatcgcttatcgatccgctggccatt
gaggatatgtcagcgctgaaagcgctattacaggatgagcaggtattaaagtttctccat
gctggcagtgaggatctggatgtttttcagcacgcgtttggcgtcatgccgacgccgttt
attgatacgcaaatcgttgcggcgtttttagggcatccattgtcctgtgggttcgcaaat
atggttgaaacgtacagcggcatagcgcttgataaaagcgaatcgcgtaccgactggctg
gcgcgcccgctttccgagaaacaattagcctacgcggccgcggatgtttggtacttactg
ccactggcgcgtcggctgatggatgatatctccagcagcggctggctggcggctgcgcag
gatgagtgtgcgctgatggcgcgccgccgggcggaagtggtttctccacgggaagcctgg
cgcgatattggcaatgcctggcagttacgcacccgccagctaggttgtttacggctgctg
gcagcgtggcgtcttgaggaagcgcgccgtcgcgatttagccgttaattttgtcgtacga
gaagagcatctttggcaggttgcgcgttacatgccgggatcgctgggagagctggatagc
ctggggctttccggtagcgaaatccgctttcacggtaaaatgttgataacactggttgaa
caggcgcaggaactcccggagtctgctttgcctgaaccacttatcaatctgattgatata
ccaggctatcgcagtatttttaaatcgattaagcaggtcgttcaggaaacggcggcggaa
aataaactggggccagaactaattgcctcgcgccggcaaataaatcaactgcttaactgg
cactggggattaaaagctgcgtatccagagccgcttagcggctggcggggagagctgctg
ggagaaaaactacgcgccgtgctatccgcgctccagtaa
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