Arthrobacter alpinus R3.8: AOC05_01690
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Entry
AOC05_01690 CDS
T04095
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaq
Arthrobacter alpinus R3.8
Pathway
aaq03420
Nucleotide excision repair
aaq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOC05_01690
03430 Mismatch repair
AOC05_01690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaq03400
]
AOC05_01690
Enzymes [BR:
aaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AOC05_01690
DNA repair and recombination proteins [BR:
aaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC05_01690
MMR (mismatch excision repair)
Other MMR factors
AOC05_01690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALE91363
UniProt:
A0A0M4RMJ4
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All DBs
Position
402983..405592
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AA seq
869 aa
AA seq
DB search
MDMLFDPYAKKPKAADQGALPGLHGSLHAELPAWMPSEDPGADAPESAEPASGEPEYLRA
TSGLGAASAPTHGTSRWPDPAELLEGMNPEQEAAVVHAGSPLLIVAGAGSGKTRVLSHRI
AYLLATGRAHPGQILAITFTNKAAAEMRERITALIGEPAKTMWISTFHSSCVRILRREAK
TIGLNTNFSIYDSADSLRLITLISKGLSLDPKKFAPKAIMHKISALKNELIDADENSANT
NFQDPFAAAVAEVYSGYTQRLRQANAMDFDDLIAQTVYMFRAFPGVADAYRRRFRHVLVD
EYQDTNHAQYALVREIVGEEGPVSGGPSSTSGWESIEPAELTVVGDSDQSIYAFRGADIR
NIVEFEKDYPSADTIKLEQNYRSTQNILSAANAVISRNPNRREKRLWTAEGDGEKIVGYV
AESEHEEARFIAEEIDRLQDETDIRPGDVAIFYRTNAQSRAIEDILVRVGLPYRVVGGTR
FYERKEIKDALAYLRALVNPDDDVNLRRILNEPKRGIGDRAEGAVAALAERERISFSAAL
ARAEEAPGIASRSLNMVNAFAKMMADLGEVAATSGPATALEAVLEQSGYLEALRTSNDPQ
DESRVENLAELLAVVREFEKDNPEGKLGEFLEQVSLVADADQIPDAPGGSEAEAAAAVAE
AKRLGVVTLMTLHTAKGLEFPVVFLTGMEHGIFPHSRSATDPKELAEERRLAYVGLTRAR
KRLYLTRSEVRSLWGQSQYNPASQFIDEVPAELIEWKREGTSRVAPTGGGGFGTSRYSGS
SWGAGSAVGGLDAGQLPASLSARTAAGRVQPQKEVISVVVGDRVNHTSFGDGTVTAVQGA
GDKTVATVQFSIGEKRLLLRYAPVTKLEP
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatatgttgtttgacccttacgccaaaaagcccaaagctgcagatcaaggggccctg
cccggcctccacggaagcctccacgccgagcttccggcctggatgccgtcggaagatccc
ggtgcggacgcacccgaatccgcagagcccgcctccggcgagcccgaataccttcgcgcc
accagcggcctcggggccgcctctgctccgacacacggcaccagccgttggccggacccg
gccgagctcctggagggcatgaacccggagcaggaagccgccgtggtccatgctggctcg
ccgttgctcattgtggcaggggcaggctcgggcaagacccgcgtgctcagccacaggatc
gcgtacctgctggccaccggccgggcccaccccggccagatactggccatcaccttcact
aacaaggccgcggcggaaatgcgtgagcgcatcacggcgctcatcggcgaacccgccaag
accatgtggatctccaccttccactcctcctgtgtgcggatcctgcgccgcgaggccaag
accatcgggctgaacaccaacttttccatctatgactccgccgactccctacggctgatc
accttgatctccaagggcttgtcgctggatccgaagaagttcgcgcccaaggcgatcatg
cacaagatctcggcgctgaagaacgagctcatcgacgccgacgagaactccgccaacacc
aacttccaggaccccttcgcggccgccgtggcggaggtctactccggctacacccagcgc
ctacgccaggccaacgccatggactttgacgacctcatcgcccagaccgtgtacatgttc
cgggccttccccggcgttgccgacgcctaccgccgccgtttccggcacgtgttggtggac
gagtaccaggacaccaaccacgcccagtacgcgctagtgcgcgagattgtgggcgaggag
ggaccggtatccggggggcccagctcgacctccgggtgggagagcattgagccggccgag
ctgacagtggtgggcgactccgaccagtccatctacgccttccgcggggccgacatccgc
aacatcgttgagttcgaaaaggactatcccagcgccgacaccatcaagctggagcagaat
taccgctccacccagaacatcctctccgccgccaacgccgtgatctcgcgcaaccccaac
cgccgtgaaaagcgtctgtggaccgcagagggtgacggtgagaagatcgttggctacgtt
gccgaatccgagcatgaggaagcccggttcatcgccgaggagattgacaggctccaagac
gagaccgacatccgccccggcgacgtcgccatcttctaccgcaccaatgcccagtcccgc
gccatcgaggacatcctggtccgtgtgggcctgccctaccgggtggtgggcggcacccgc
ttctatgagcgcaaggaaatcaaggatgcgctggcctacttgcgcgccctggtgaacccg
gatgacgacgtgaacttgcgcaggatcctcaacgaacccaagcgcgggattggcgaccgg
gccgaaggggccgtggcggcgctggccgagcgcgaacgcatctccttctccgcggcgctg
gcccgtgccgaagaggcaccgggcatcgcctcccgctcactgaacatggtcaatgccttc
gccaagatgatggcggacttgggcgaggtggccgccacttcggggcctgcaactgccctt
gaggccgtgctggaacaatctggctacctggaggcgttgcgcacctcaaacgatccccag
gacgagtcgcgggtggagaacctggccgagcttctcgccgtcgtgcgtgaatttgagaag
gacaatcccgaggggaagctgggggagtttctggaacaggtctccctcgtagccgacgcc
gaccagatccccgacgcccccggcggatccgaagccgaagctgccgccgccgtcgcggag
gccaaacgccttggcgtggtgacgctgatgaccctgcacacggccaaggggctggagttc
cccgtggtgttcctgacgggcatggaacacggcatcttcccgcattcacgctccgccacg
gaccccaaggagctcgccgaggaacgccgcctggcctatgtgggcctgacccgtgcgcgc
aaacgcctgtacctgacgcgctcggaggtgcgcagcctgtgggggcagagccagtacaac
cccgccagccagttcatcgacgaggtccccgcggaactgatcgaatggaagcgtgagggg
acctcccgcgtggcccccacgggtgggggcgggttcggcaccagccggtactccgggtcc
tcctggggagcagggtccgcagtgggcgggctcgacgccggccagcttcccgccagcctc
tccgccaggaccgcggcgggccgggtccagccgcaaaaggaagtcatctccgtggtggtc
ggggacagggtcaaccacacctccttcggggatggtaccgtcaccgccgtgcaaggcgcc
ggggacaagaccgtggctaccgtgcagttcagcatcggcgagaaacggctgctgctgcgc
tatgcgcccgtcaccaagttggaaccttga
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