Arthrobacter alpinus R3.8: AOC05_09140
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Entry
AOC05_09140 CDS
T04095
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
aaq
Arthrobacter alpinus R3.8
Pathway
aaq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aaq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOC05_09140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aaq03000
]
AOC05_09140
Transcription factors [BR:
aaq03000
]
Prokaryotic type
Helix-turn-helix
IclR family
AOC05_09140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_20
HTH_5
HTH_24
DUF7343
TrmB
HTH_Crp_2
HTH_CodY
DUF4143
DUF7437
HTH_10
DUF4423
HTH_Cmi2_C
HTH_23
Rrf2
HTH_27
Fe_dep_repress
TFIIE_alpha
DUF4148
Motif
Other DBs
NCBI-ProteinID:
ALE94121
UniProt:
A0A0M4RRZ8
LinkDB
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Position
complement(2046404..2047198)
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AA seq
264 aa
AA seq
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MQLKTQKRGDARVNATPAPAVTRAAAVLDALAASVTGRLTLSDLARELGIPKSSTSNLLQ
ALEDADLISRLGSDYALGVKLVELGAAYLSRRDEVREFHRFCERAPLLKGETVRIAMLDG
DNVIYLARYEGHPAVTLTSNIGDKMPVSLCAVGKALVAQLHDHDLEQLFPDEAVLPVMTA
RSLRTGREFKAELAQIRAKGYAFEDEESTLGVVSLGVAVPTRGSHGPRLAVSVTALKATF
SQEQRQAMVQELSDLTKMLGNPMG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atccaactcaagacccagaagcgcggtgacgcgagggtgaatgcaacgccagctcctgcg
gtgacccgtgccgcagccgtgcttgacgccctcgctgcgtccgtcacagggaggctcacg
ctcagcgacctggcccgcgagctgggtatccccaagtcttcgacatcaaaccttttgcag
gcacttgaggatgcggacttgatcagccggctcggctccgactatgcgctaggtgtgaaa
ctggttgaattgggtgcggcttatttgagccgcagggatgaggttcgggagttccaccgc
ttctgcgaacgagctcctttacttaagggcgaaacggttcgcattgccatgctcgacggt
gacaacgtcatctacttggcccgctacgaggggcatcccgcggtaacgctgacctccaat
attggtgacaagatgccggtgtcactctgcgcggtagggaaggcactggttgcccagctc
cacgatcatgaccttgaacagctctttccagatgaggcagtgctgcccgtcatgactgcc
aggtcgctgaggaccggccgtgagttcaaggccgaacttgcgcagattcgcgctaagggc
tatgccttcgaggatgaggagtcaaccctgggggtggtgagcctgggtgttgccgtcccc
acgcgcggctcgcatggcccacgcctggccgtatccgtgactgcattgaaggcgacattc
tcccaggagcagcgccaagccatggtgcaggagctgtccgatctgacaaaaatgctggga
aatcccatggggtag
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