KEGG   Arthrobacter alpinus R3.8: AOC05_17125
Entry
AOC05_17125       CDS       T04095                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aaq  Arthrobacter alpinus R3.8
Pathway
aaq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aaq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOC05_17125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aaq03019]
    AOC05_17125
Messenger RNA biogenesis [BR:aaq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AOC05_17125
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RNase_J_C RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Fn3_Dep-1_1st
Other DBs
NCBI-ProteinID: ALE93640
UniProt: A0A0M4R0U5
LinkDB
Position
3758382..3760055
AA seq 557 aa
MRRTARQTPPALAEGAMRIVALGGLGEIGRNMTVFEFAGKLLIVDCGVLFPEEHHPGVDL
ILPDFSYLKDRWQDVVGLVLTHGHEDHIGGVPYLLKHRADIPVISAKLTLAFLKTKLEEH
RIKGKLIQVKEGDRRKYGPFDVEFLAVNHSIPDGLAVAIRTPAGLVLETGDFKMDQFPLD
KRITDLAGFARLGEEGVDLFMPDSTNAEVPGFLAAEADLIPAIDQVMRTAPRRVVVSSFA
SHVHRIQQIIDSAHKYNRKIAFVGRSMVRNMTTARELGYLKIPRGMLVDAKELAKMDATK
AVLICTGSQGEPMAALARMANGDHQINLTEGDTVLLASSMVPGNESSIYRLINDLTKQGA
NVIHKGNAKVHVSGHASAGELVYCYNLVRPKNVMPVHGEYRHLKANAALAVRTGVDPKNA
FIVDDGTALDLKDGVVKISGSVPAAYVYVENMVAGAATEESLQDRIRLAQDGAVTVLLIV
NPDTGKIEEDPEYFAVGFNLTDKDIEKATGIVEKTVAGLRGEKTGHGAEKAIADALLRWS
DRALRRKPVYTVIIVEA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgagaagaaccgcccgccagaccccgcccgcccttgccgaaggggcaatgcgcatcgtc
gccctcggaggtttgggggagatcggccgcaacatgaccgtcttcgaatttgcaggaaag
ctgttgatcgttgactgcggggtgctcttccctgaggagcaccatcccggcgtggacttg
atcctgcctgatttctcctacctgaaggaccgttggcaggacgttgtgggcctggtgctc
actcacgggcacgaggaccacatcggcggcgtgccgtacctgctcaagcaccgcgccgac
atccccgtcatttccgccaagctgaccctggccttcctcaagaccaaacttgaagaacac
cggatcaagggcaaactgatccaggtcaaggaaggggaccgtcgcaagtacggcccgttc
gacgtcgaattcctggccgtcaaccactccatccccgacggcctggccgttgccatccgt
acccctgccggcttggtgttggaaaccggcgacttcaagatggaccagttcccgctggac
aagcgcatcaccgacctggccggctttgcccggctgggcgaggaaggcgtggacctgttc
atgcccgactccaccaacgccgaggtccccggcttcctggccgccgaggccgacctgatc
ccggccatcgaccaggtcatgcgcacggccccgcgccgcgtggtggtttccagcttcgcc
agccacgtgcaccgcatccagcagatcatcgattccgcgcacaagtacaaccgcaagatc
gcgtttgtgggccgctccatggtccgcaacatgaccactgcccgcgaacttggctacttg
aagattccgcgcggcatgctggtcgacgccaaggaactggccaagatggacgccaccaag
gccgtcctgatctgcacaggttcgcagggcgagcccatggcagccctggcacggatggcc
aacggagaccaccagatcaacctgaccgagggcgacaccgtcctgctggccagctccatg
gtgcccggcaacgagtcctcgatttaccgtctcatcaacgacctgaccaagcagggcgcc
aatgtgattcacaagggcaacgcgaaggtccacgtctccgggcacgccagcgccggcgaa
ctggtctactgctacaatctggtgcgccccaagaacgtcatgccggtgcacggcgaatac
cgccacctgaaggcgaacgcggcactggccgtacgcaccggcgtcgacccgaagaacgcg
ttcatcgttgacgacggcacggcgctggacctcaaggacggcgtcgtcaagattagcggt
tccgtccccgccgcctacgtgtacgtggagaacatggttgccggtgcggccaccgaggag
tccttgcaggaccggatccgcctggcccaggacggcgccgtcacggtgttgctgatcgtc
aatcccgacaccggcaagatcgaagaggacccggagtactttgcggtgggcttcaacctc
accgacaaggacatcgagaaggccactggcatcgtggaaaagacggttgccgggctccgc
ggtgaaaagaccggccacggcgccgaaaaggccattgccgacgccctgctgcgctggtcg
gaccgcgccctgcgacgcaagccggtttacacggtcatcatcgtagaagcgtaa

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