Ampullimonas aquatilis: ACMYR3_12285
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Entry
ACMYR3_12285 CDS
T11161
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aaqa Ampullimonas aquatilis
Pathway
aaqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMYR3_12285 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaqa03019
]
ACMYR3_12285 (pnp)
03016 Transfer RNA biogenesis [BR:
aaqa03016
]
ACMYR3_12285 (pnp)
Enzymes [BR:
aaqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACMYR3_12285 (pnp)
Messenger RNA biogenesis [BR:
aaqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACMYR3_12285 (pnp)
Transfer RNA biogenesis [BR:
aaqa03016
]
Prokaryotic type
tRNA degradation factors
ACMYR3_12285 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
SAICAR_synt
DUF5813
OB_RRP5_4th
KH_KhpA-B
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XRK11758
LinkDB
All DBs
Position
complement(2635289..2637424)
Genome browser
AA seq
711 aa
AA seq
DB search
MFNKVTKTFQWGAHKVVMETGEIARQASGAVLVDMEETVVLATVVAAKKAKAGQDFFPLT
VDYIEKTYAAGKIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGFYNEVQVVVHVLSV
NPEVDSDIPALIAASAALSIAGIPFNGPMGAARVGYIDGQYILNPTTIELKDSKMDLVVA
GTESAVLMVESEADQLSEEIMLGAVVFGHEQAKVAIEAIHELVRDAGKPVWEWQPAPKNE
PLIAAVKELAEGKLRDAYQIRQKQERSAKLKEVYSAVNAALAEQAAAKGDSAPDDVDVGN
LMFELEAGIVRNQILDGEPRIDGRDTRTVRPISIRLGVLPRTHGSALFTRGETQALVVAT
LGTGRDEQIIDSLQGEYRDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAPEDFSYSVRVVSEITESNGSSSMASVCGGCLAMMDAGVPMKAHVAGIAMGLIKDGNKF
AVLTDILGDEDHLGDMDFKVAGTATGVTALQMDIKIQGITKEIMQVALAQANEARLHILG
KMQEAITGGRTELSTFAPRLITIKINPEKIRDVIGKGGAVIRALTEETDTQIDISDEGVV
TIACTSAEGGEAAKKRIEALTAEVEVGRIYEGTVLKLLDFGAIVQVLPGKDGLLHISQIA
NERVNAVVDYLKEGQVVRVKVLEADEKGRLRLSMKAASGDLEPVQQQQQQQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaagtgactaaaactttccagtggggcgctcataaagtcgtcatggaaact
ggtgagatcgctcgccaagcgagtggtgctgtgctggttgatatggaagaaaccgttgtt
ctggcaaccgttgttgctgctaaaaaagccaaggcaggtcaagatttcttcccgctgacc
gttgattacattgaaaaaacttacgcggctggcaaaattcccggtggtttcttcaagcgt
gaaggcaaaccgtccgaaaaagaaacactgacatctcgtctgattgatcgtccaattcgt
ccattgtttcctgaaggcttttataacgaagtgcaagtggttgtgcacgttctgtcggtc
aatccggaagttgattctgatattcctgcgttgattgctgcttcagcggccctctccatt
gctggcattcctttcaatggcccaatgggtgcggcgcgtgttggttatatcgacggtcaa
tatattttgaacccgaccacgatagaactcaaagattccaagatggatctggttgtggct
ggtactgaatcggcggtgttgatggttgagtccgaggccgatcagttgtccgaagaaatc
atgttgggtgccgtggtatttggtcacgagcaagccaaggttgccattgaagcgattcat
gagctggtgcgtgatgcgggtaagccggtatgggaatggcagcctgctccaaaaaatgaa
ccattgattgcggctgttaaagagttggccgaaggcaagttgcgtgatgcctaccagatt
cgtcaaaagcaggagcgtagtgccaagctcaaggaagtttattctgctgttaatgccgct
ttggctgagcaagctgcagctaagggtgactctgcgccagatgatgtggatgtgggtaat
ctgatgtttgaattggaagcgggcattgttcgtaaccagattcttgacggagagccacga
attgatggtcgtgatacccgtaccgttcgcccaatcagtattcgtcttggtgtactacca
cgtactcacggttctgccttgtttacgcgtggtgaaacccaggctttggtcgtggctact
ttgggtacggggcgtgatgagcaaattatcgattcactgcaaggtgagtatcgtgaccgc
ttcatgcttcattacaatatgcctccttttgcaactggcgaaactggtcgtgttggtaca
cctaagcgtcgcgagattggtcatggtcgtcttgccaagcgcgctctgattgcggcactg
ccagccccagaagactttagctacagcgtgcgtgtggtttcagagattaccgaatccaat
ggctcttcatcaatggcttcagtttgtggtggttgcttggccatgatggatgcgggtgtg
ccgatgaaggcgcatgtggctggtattgccatgggtctgatcaaggatggcaacaagttt
gccgttctgacagatatcttgggtgatgaagatcacctgggcgatatggatttcaaagtg
gcgggcactgcaaccggcgtgactgctttgcaaatggatatcaagattcaaggtattacc
aaagaaattatgcaggttgcattggctcaggctaatgaggcacgtttgcatattcttgga
aaaatgcaggaagccattacgggtggccgtactgaattgtcaacctttgcaccgcgtctg
attacgatcaagattaatccagaaaaaattcgtgatgtgattggtaagggtggggcggtg
attcgtgcgctgactgaagaaacggatacgcaaatcgatatttctgacgaaggcgtcgtc
actattgcctgtaccagtgctgaaggtggtgaggctgccaagaagcgtattgaggcgctg
actgctgaagttgaagttggcagaatttacgaaggtaccgtgcttaaactattggatttt
ggtgcgattgtgcaagtgttgccaggtaaagatggcttgttgcatatcagccagattgcc
aatgagcgcgtcaatgcagttgttgattacttgaaagaaggtcaggtagtgcgcgttaag
gtgctcgaagctgatgaaaaaggccgtttacgtttgtctatgaaggccgcttcaggtgac
ttggagccagttcaacaacagcagcaacagcaataa
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