Ampullimonas aquatilis: ACMYR3_12500
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Entry
ACMYR3_12500 CDS
T11161
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
aaqa Ampullimonas aquatilis
Pathway
aaqa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACMYR3_12500 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqa03400
]
ACMYR3_12500 (uvrB)
DNA repair and recombination proteins [BR:
aaqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACMYR3_12500 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACMYR3_12500 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
P-loop_SecA
UB2H
Motif
Other DBs
NCBI-ProteinID:
XRK11797
LinkDB
All DBs
Position
complement(2677915..2680014)
Genome browser
AA seq
699 aa
AA seq
DB search
MTDLSEVNSSLDESKFVTFADSPYQLYQPFAPAGDQPVAIDQLVEGLADGLSYQTLLGVT
GSGKTFTMANVIARTGRPAIIFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPNEYHQMILTL
RVHDKLSQRDVISKLIHMQYSRNELDFSRGTFRVRGDTIDIFPAEHAELAVRVELFDDEV
ESLQLFDPLTGRIKQKIPRFTVYPGSHYVTPRETVINALETIKEELRDRLEFFYKENKLV
EAQRLEQRTRFDLEMLQEIGFCKGIENYSRHLSGAKAGEPPPTLVDYLPQDALMFLDESH
VLIGQLNGMYNGDRARKQNLVDYGFRLPSAMDNRPLKFEEFEGKMRQAMFVSATPADYEK
QHAGQVVEQVVRPTGLIDPEIFVRPATSQVDDVLSEINLRSKVGERVLVTTLTKRMSEQL
TDYLSEHGVKVRYLHSDIDTVERAEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRNERSLIQTIGRAARNLHGTAILYADKVTGSMQRAIDETNRRRTKQLAHNEAE
GITPQSVKKLVRELIDGVYNPQEAKAELKAAQDKARYEEMSEKEASKEIKRLEKLMLEHA
RNLEFEKAAQVRDQLAMVKEQLFGASGGSNIASIVGKQP
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgactgacctgagtgaagtgaattcgtcgctggatgaatccaagtttgtgacttttgct
gattcgccttatcagctgtatcagccgtttgcgcctgcgggggatcagccggtggcgatt
gatcagttggtggagggtttggccgatggtttgtcgtaccagactttgctgggtgtgacg
ggttcgggcaagacgtttacgatggccaatgtgattgcgcgcaccggccggccggcgatt
atttttgcgcctaacaagaccttggcagcgcagttgtattcggagtttcgcgagtttttt
ccgcgcaatgcggttgagtattttgtcagttattacgactactaccagcccgaggcgtat
gtgccgcagcgtgatctgtttattgaaaaggattcgtccatcaatgagcatattgagcag
atgcgtctgtcggcgaccaagagtttgatggagcggcgtgatgtggtgattgtggccacc
gtgtcggcgatttacgggattggtaatcccaatgaatatcatcagatgattttgacgctg
cgggtgcatgacaagctgagccagcgcgatgtgatcagcaagctgattcatatgcagtac
tcgcgcaacgagctggactttagccgtggcacgtttcgcgtgcgcggtgacacgatcgac
atctttccggccgaacatgccgagctggcagtgcgggtagagctgtttgatgatgaggtg
gaaagcctgcaactgtttgatccgttgacagggcgtatcaagcagaagattccgcgcttt
acggtgtacccaggctcacattatgtgacgccgcgcgagacggtgatcaatgcgctggaa
accatcaaggaagagctgcgcgaccggcttgaatttttttataaagaaaacaaactggtc
gaggcacaacggttggagcagcgtacccgctttgatctggaaatgctgcaggagattggc
ttttgcaagggcattgaaaattactcgcgccatttgtctggtgccaaggcgggtgagccg
ccaccgacgttggtggattatctgccgcaggatgcgttgatgtttctggatgagtcgcat
gtgctgattggccagctcaatggcatgtacaacggtgaccgggcgcgtaaacaaaatctg
gtggactatggtttcagattgccttcggcgatggataaccgaccattaaaatttgaagaa
tttgaaggcaagatgcgccaggccatgtttgtgtctgccacgccagccgattatgaaaag
cagcatgccgggcaggtggtggagcaggtggtgcgaccgactggcttgattgatccggag
atttttgtgcgaccggccacctcgcaggtggatgatgtgttgtctgaaatcaatttgcgc
agcaaggtgggcgagcgggtgctggtgaccacgctgaccaagcgcatgtcggagcagttg
accgattatctgtcggagcatggtgtcaaggtgcgttatctgcacagcgatattgatacg
gtggaacgcgccgagatcatccgggatttgcggctgggcacctttgatgtgctggtgggc
attaacctcttgcgtgaaggattggatattccagaagtgtcactcgtggcgattctggat
gccgacaaggaaggctttttacgcaacgagcgcagcctgattcaaaccattggccgcgct
gcgcgtaacttgcatgggactgccattttgtatgcggacaaggtgacgggctcgatgcaa
cgtgccatcgacgaaaccaatcgtcgacgtaccaagcaattggcgcataacgaggccgaa
ggcattacgccacaaagtgtcaagaagctggtacgtgagctgattgatggcgtgtacaac
ccgcaagaagccaaggccgagcttaaagccgcgcaggacaaggcgcgctatgaagagatg
agcgagaaggaagcatccaaagaaatcaagcggctggaaaaattaatgcttgaacatgcc
cgtaacctggaatttgaaaaagcggcccaggtgcgtgaccagttggcgatggtcaaggag
caattgtttggtgccagtggtggcagcaatattgccagcattgtgggtaagcagccttag
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