Ampullimonas aquatilis: ACMYR3_14180
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Entry
ACMYR3_14180 CDS
T11161
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aaqa Ampullimonas aquatilis
Pathway
aaqa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACMYR3_14180 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqa03400
]
ACMYR3_14180 (uvrA)
DNA repair and recombination proteins [BR:
aaqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACMYR3_14180 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACMYR3_14180 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
nSTAND1
AAA_23
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_25
BCA_ABC_TP_C
Viral_helicase1
cobW
DUF7862
Motif
Other DBs
NCBI-ProteinID:
XRK12109
LinkDB
All DBs
Position
3049254..3052130
Genome browser
AA seq
958 aa
AA seq
DB search
MTSLRDLIRIRGARTHNLKNINLDLPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVES
LSAYARQFLQMMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVG
TPYCPDHHLPLAAQSVSQMVDAALELPEDTKLMILAPVVANRKGEHVDLFAAMQAQGFVR
FRIRSENIKGDSSDSKIYEADALPKLKKTEKHTIDVVVDRLKVKADMKQRLAESFETALR
LADGRAIALEMDSTQEHIFSSKFSCPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQIQF
FDARRVVAFPNLSLASGAIKGWDRRNQFYFQLLQNLAAFFEFDIDAPFNELPEATREIIL
NGSGKQVIPFTYANERGKPVVKEHTFEGVLKNLERRYKETDSMAMREELSKYINTKPCPH
CEGTRLRREARHVKVGDKKSARAIFEVSAMPLDAARDYFDSLKLKGNKADIADKIIKEIA
ARLNFLNNVGLNYLSLDRSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDN
DRLIDTLKHLRDLGNSVLVVEHDEDMIRASDYVVDMGLGAGVHGGAVIAEGTPAQIEKSK
NSLTGQYLSGKKSIAIPAQRHAPTDKRIRIEGASGNNLKDVTLDLPVGLLTCVTGVSGSG
KSTLINDTLYHAVAHHLYGSQTEPAPYQTISGLEHFDKVIAVDQSPIGRTPRSNPATYTG
LFTPIRELFADVPQARERGYGPGRFSFNVKGGRCETCQGDGVIKVEMHFLPDVYVPCDVC
HGKRYNRETLEVLYKGKNIHEVLEMTVEGAFEFFKVVPVVARKLQTLLDVGLGYIRLGQS
ATTLSGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFQDIELLLRVIHRLRDQGNTLV
IIEHNLDVIKTADWLIDLGPEGGGGGGQIIAQGTPEAVAAAPASFTGKYLATLLKSRK
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgacttctttacgcgacctgattcgtattcgtggtgcccgcacccacaatttaaaaaac
atcaacctggatttaccgcgtgacaagctggtggtgattactggcttgtcgggttcgggc
aagtcgtcgctggcgtttgatacgctctatgccgaaggccagcggcgttatgtggaaagc
ctgtcggcctatgcgcgacagtttttgcagatgatggaaaagcccgatgtggatctgatt
gaaggtctgtcaccggcaatttccatcgagcaaaaagccacctcacataacccgcgctcc
accgtgggcaccgtcaccgaaattcatgattacctgcgcctgttgtttgcgcgggttggt
acgccctactgccccgaccatcatttgccattggccgcacaaagtgtcagccagatggtc
gatgcagcactggaactgcccgaagacaccaaactgatgattctggcacccgtagtggcc
aaccgtaagggcgaacatgtggacctgtttgcggcgatgcaggcacagggttttgtgcgc
tttcggatccgctccgaaaacatcaagggtgatagcagcgacagtaagatttacgaagcc
gatgccttgcccaagttgaaaaaaacagaaaaacacaccattgatgtggtggtggatcgg
ctgaaagtgaaagccgacatgaagcaacgtctggccgagagttttgagaccgcgctgcgg
ctagccgatggccgcgccattgccctcgaaatggatagcacccaggaacatattttttcc
agcaagttttcttgcccggtgtgcagctattccttgcaggagctagagccacggctgttt
tcatttaacaacccgatgggtgcctgcccaacctgcgatggcctggggcaaattcaattt
tttgatgcgcgccgcgtggtggcttttcccaacctgagtctagcatcgggcgcaatcaag
ggctgggatcgacgcaatcagttttactttcagctcttgcaaaatctggccgcgtttttt
gaatttgatattgatgcgccatttaatgagttgccggaagccacccgtgaaatcattctt
aatggttcgggcaagcaggtgattcctttcacctatgccaatgagcgcggcaagccagtg
gtgaaggagcatacctttgagggcgtactgaaaaatctggagcgccgctataaagagacc
gactcgatggcgatgcgcgaagagttgtccaagtacatcaacaccaagccttgtccgcat
tgcgaaggcacgcggttgcgtcgtgaagcacggcatgtgaaggtcggcgataaaaaatcg
gcacgcgcaatttttgaagtttcggccatgcctttggatgcagcgcgcgattattttgac
agtctcaaactcaaaggtaacaaggcggatattgccgacaagatcatcaaggaaattgcg
gcacgactgaattttttaaataacgtcgggctcaattatctgtcgctggatcgcagcgcc
gacaccctctcgggcggtgaagcacaacggatccggctggcctcccaaattggctcgggc
ctgactggtgtgatgtatgtgctcgatgaaccttccatcggcctgcatcaacgcgacaat
gatcggctgattgacaccctcaagcacttgcgtgatctgggcaatagcgtactggtggta
gagcatgatgaagacatgatccgcgccagtgattatgtggtcgatatgggcctgggtgcg
ggcgtgcatggcggcgcggtaattgccgaaggcacaccggcacaaattgaaaaaagtaaa
aattcattaaccggccaatatctgtccggcaaaaaatcgattgcgattccagcccaacgc
catgccccgacggataaacgaattcgcattgaaggcgccagcggcaacaatctgaaagac
gtgacactggacttgccagtcggcttgctcacctgtgtgacgggtgtgtccggctcgggc
aaatccaccctgatcaatgacacgctctatcacgccgtagcacatcacctgtatggttcg
cagaccgagcccgcgccgtatcaaaccattagtggcctggaacattttgataaagtgatt
gcggttgaccaaagcccgattggtcgcacgccacgctccaacccggctacctataccggc
ctctttacgcccatccgcgaactgtttgccgatgtgccgcaagcgcgtgaacgcggctat
gggccgggacgtttttcatttaacgtcaagggtggtcgctgcgaaacctgccaaggcgat
ggcgtgatcaaggtggaaatgcattttctgcccgatgtgtatgtaccctgcgatgtctgt
cacggcaaacgctataaccgcgaaactctggaagtgctctacaagggcaagaacattcat
gaagtgctggagatgacagtcgaaggcgcctttgaatttttcaaggtggtgcccgtggtt
gcccgcaaactgcaaaccctgctcgatgtgggtctgggttatatccgcctgggccaaagt
gcgaccacgctatccggcggtgaagcgcagcgcgtcaagctgtcactcgaactatccaaa
cgtgataccggccgcacgctctacattctggatgagccgaccactggcctgcattttcag
gatattgaactgctgctcagagtgattcatcgcctgcgcgatcagggcaatacactggtc
atcatcgagcacaatctggatgtcatcaaaaccgccgactggctgattgatctgggcccc
gaaggcggtggcggtggtggccaaatcatcgcccaaggcactccggaagccgtcgcagca
gcacccgccagctttactggcaaatatctggcgacgcttttgaaaagcagaaaataa
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