Ampullimonas aquatilis: ACMYR3_15315
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Entry
ACMYR3_15315 CDS
T11161
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aaqa Ampullimonas aquatilis
Pathway
aaqa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aaqa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACMYR3_15315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aaqa03021
]
ACMYR3_15315
03400 DNA repair and recombination proteins [BR:
aaqa03400
]
ACMYR3_15315
Enzymes [BR:
aaqa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACMYR3_15315
Transcription machinery [BR:
aaqa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACMYR3_15315
DNA repair and recombination proteins [BR:
aaqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACMYR3_15315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XRK12316
LinkDB
All DBs
Position
complement(3284862..3285839)
Genome browser
AA seq
325 aa
AA seq
DB search
MLNAFLKPKIVEVESLTDGHARVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVLIGG
VVHEYSTLDGVQEDVVNLLLNLKGIVFKLHSRDEVTVSLRKEGLGPIYASDIELPHDVEI
INPNHLIATLTQGGKLDVQIKVEKGRGYVPGTMRRYVDDSPKSIGRIVLDASFSPVKRVS
YAVESARVEQRTDLDKLVMTIETNGVISPEEAIRQSARILVDQLSIFAALEGTEQSAEIR
QPETKVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPASLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgcttttttgaagccgaagatagttgaagtagagtcattgaccgatggtcat
gcgcgtgttgtgatggagccttttgagcgtggttatggccatactcttggtaatgcatta
cgtcgtgtattgctctcttcaatggtgggttatgcgccaactgaagttctgatcggtggc
gtagtccatgaatattctactttggatggcgtgcaagaggatgtggttaatcttttgctg
aatctgaagggcattgtatttaaattgcatagtcgtgatgaagttactgtgtctttgcgt
aaagaaggtttgggtcctatttatgcgtcagatattgagttgccgcacgatgttgaaatt
atcaatcctaatcacctgattgccaccttgactcaaggtggcaaactggatgtgcagatc
aaggttgaaaaaggccgtggttatgtgcctggtacaatgcgccgttatgttgacgatagc
ccgaagagtattggtcgcattgttctggatgcttcattctcgccagtaaagcgtgtgtct
tatgcagttgagtccgctcgtgttgaacagcgtacggatctggacaagttggtgatgacc
attgaaaccaatggcgtgatcagccctgaagaagccattcgtcaatcagcccggattctg
gttgatcagctgtcaatttttgctgctctggaaggtactgagcaatctgcagaaattcgt
cagccagagaccaaggttgatccaatcctgttgcgtccggttgatgatttggaattgaca
gtgcgttctgccaattgtttgaaagccgaaaatatctattacatcggtgatctgattcaa
cgtactgaaaatgaattgctcaagacccccaatctgggccgcaaatccttgaatgaaatc
aaggaagttctggcttcacgtggtttgaccttgggtatgaaactcgagaactggccacca
gccagccttgataagtaa
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