Arcobacter aquimarinus: AAQM_0304
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Entry
AAQM_0304 CDS
T06604
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aaqi
Arcobacter aquimarinus
Pathway
aaqi03030
DNA replication
aaqi03430
Mismatch repair
aaqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAQM_0304 (holA)
03430 Mismatch repair
AAQM_0304 (holA)
03440 Homologous recombination
AAQM_0304 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaqi03032
]
AAQM_0304 (holA)
03400 DNA repair and recombination proteins [BR:
aaqi03400
]
AAQM_0304 (holA)
Enzymes [BR:
aaqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAQM_0304 (holA)
DNA replication proteins [BR:
aaqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAQM_0304 (holA)
DNA repair and recombination proteins [BR:
aaqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAQM_0304 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QKE25077
UniProt:
A0AAE7B460
LinkDB
All DBs
Position
306061..307041
Genome browser
AA seq
326 aa
AA seq
DB search
MYKNEFDNYLKQNKRFKSYLFYGQSTFLIEQYSLAIAQMFGNSDEIEKMYFEEYDFKYAK
DKLLQSSLFSSNNILLIKVEKKIPKKEVDSLVDACNKNPDSTLIFACLGDSEFKTMENSF
SLKTNSVAVRFFLPTDLEALKFLEYEAKMLQIKYEISALNHLYFMHKSDLSLCVNDLRKL
AILDELLTVNVIDNNCFGIGSVNFEEFLHDLISGKDISDDLSLILEEGMNEIFLLNQVTS
FVQQLFMISSYARTIGQPNPKDILGFIPPKNVWEKKSKLAINIKPEIFQEILNYLLNIEL
ELKSSKIDNQSLYLQSSLRKFTVLFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaatgaatttgataattatttaaaacaaaataaaagatttaaatcctatctg
ttttacggacaatctacttttttaattgaacaatattcattggcaattgcccaaatgttt
ggaaattcagatgaaattgaaaagatgtattttgaagagtatgattttaaatatgcaaaa
gataaattgttacaatcatcactattctcttcaaataatatattgttgataaaagttgaa
aaaaaaatacctaaaaaagaagtagatagtttagtagatgcttgtaataagaatcctgat
agtacgcttatttttgcttgtttgggagatagtgaatttaaaacaatggaaaatagtttt
tctttaaagacaaattcagttgctgttagattttttttaccaacagatttagaagctcta
aaatttttagaatatgaagctaaaatgcttcagattaagtatgaaataagtgctttgaat
catctatattttatgcataaaagtgatttatctttatgtgtaaatgatttaagaaaatta
gcaattttagatgaattattaacagtaaatgtaattgacaataattgttttggaatagga
agtgtgaattttgaagaatttttgcatgatttaataagtggaaaagatattagtgatgat
ttaagtttaattttagaagaaggaatgaatgagatttttttactaaatcaagttacttct
tttgttcagcaactttttatgataagctcgtatgcaagaactattggacaaccaaatcct
aaggatattttaggatttattcctccaaaaaatgtttgggaaaaaaaatcaaaacttgca
attaatatcaagccagaaatatttcaagagatattaaattatttattaaatatagaatta
gaattaaaatcatcaaaaatagataatcaaagtttatatcttcagtcatctctaagaaag
tttacagttttatttagatag
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