Arcobacter aquimarinus: AAQM_0544
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Entry
AAQM_0544 CDS
T06604
Symbol
dnaQ1
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aaqi
Arcobacter aquimarinus
Pathway
aaqi03030
DNA replication
aaqi03430
Mismatch repair
aaqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAQM_0544 (dnaQ1)
03430 Mismatch repair
AAQM_0544 (dnaQ1)
03440 Homologous recombination
AAQM_0544 (dnaQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaqi03032
]
AAQM_0544 (dnaQ1)
03400 DNA repair and recombination proteins [BR:
aaqi03400
]
AAQM_0544 (dnaQ1)
Enzymes [BR:
aaqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAQM_0544 (dnaQ1)
DNA replication proteins [BR:
aaqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAQM_0544 (dnaQ1)
DNA repair and recombination proteins [BR:
aaqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAQM_0544 (dnaQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QKE25317
UniProt:
A0AAE7B4M6
LinkDB
All DBs
Position
complement(550957..551577)
Genome browser
AA seq
206 aa
AA seq
DB search
MFRTIKNYFNKKNLKDEKYLFLFDKPMEDEYVCFDCETTGLNSKIDDIVSIGAVIIKNNT
IVSSKKFVKFVKPKTKLQADAIKIHHIRECDLADAEDIDDVIEEFLEYIGNRTLVGYFLE
FDIAMINKYLKPKLGIKLPNKTLEVSEIYHDYKIDVIPQSYIDLRFNTIMEDLEIPSLGK
HDAYNDALMTSMIFIKLKNLPNVKIK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaactataaaaaactattttaataaaaaaaatttaaaagatgaaaaatactta
tttttatttgataaaccaatggaagatgaatatgtttgtttcgattgtgaaacaactggg
ctaaactctaaaattgatgatattgtatctattggtgctgttataataaaaaacaatact
attgtttctagtaaaaaatttgtaaaatttgtaaaaccaaaaacaaaattacaagctgat
gctataaaaattcatcatataagagagtgtgatttagcagatgctgaagatattgatgat
gtaattgaagaatttttagaatatattggaaatagaactttagtaggatattttttagaa
tttgatattgcgatgataaataaatatttaaaacctaaattaggaattaaacttccaaat
aaaactcttgaagtctctgaaatttatcatgattataagatagatgttattcctcaaagt
tatattgatttaagatttaatacaataatggaagatttagaaataccaagtctaggtaaa
catgatgcttataatgatgcattaatgacttcaatgattttcataaaattaaaaaattta
ccaaatgtaaaaataaaataa
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