Arcobacter aquimarinus: AAQM_0610
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Entry
AAQM_0610 CDS
T06604
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aaqi
Arcobacter aquimarinus
Pathway
aaqi03420
Nucleotide excision repair
aaqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AAQM_0610 (rep)
03430 Mismatch repair
AAQM_0610 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaqi03400
]
AAQM_0610 (rep)
Enzymes [BR:
aaqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AAQM_0610 (rep)
DNA repair and recombination proteins [BR:
aaqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AAQM_0610 (rep)
MMR (mismatch excision repair)
Other MMR factors
AAQM_0610 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QKE25375
UniProt:
A0AAE7E0A6
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All DBs
Position
612993..615041
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AA seq
682 aa
AA seq
DB search
MPLSNLNQEQLEAATCPYGYNLIIASAGTGKTSTIVGRIASLINKGVKPNQILLLTFTNK
AAAEMVARVAKFFGKDIAKQIMAGTFHSVSYKLLKELNINITLKQPNELKTLFKSIYEKR
VFFERDDEASPYDGGYLYDMYSLYLNSNDGEDFASWIKSKNANHEIYTLIYEDVVAEFNE
LKTKYGYVNFDDLLTTMLQILKEKEFDFKEILVDEYQDTNPLQGRLLDGFRPKSLFCVGD
YDQSIYAFNGSDIGIISTFVKRYENAKVFTLRKNYRSTKPILDLATKVIEYNERVYEKKL
EVVRKETEYKPKLLAFNELFSQYEYISELISKSETPHSEIAIIYRNNSSADGIEANLREF
SIPARRKGGMSFFDSVEVKFILDILVMQLSHNDMMAFIHIVEHGKGIGKAIAKDIFDALI
KLGDGDLLKGFFHPRDDIKNPYENGKIKNQQLGLFDDFVELGSISKFKDCNFEEAFLGNP
ILKHPKLNVDGGKYLYDIYLLLKQLRRSKNPETLIGGIISSMAYSKLKDFLSTKRATQKD
GTINPMQKTKALAKINRKGMLLKNLSRNFNDLSKFINSMILGGSEMSEGEGVNLLSIHAS
KGLEFKEVYVIDLMDGRFPNRKLMSKGGSIEEERRLFYVAVTRAKDILYLSYAKYDKIKK
MTFVASPFLKEAGMIIKDSEES
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatcaaatttaaatcaagaacaactagaagcggcaacttgtccttatggttat
aatcttataatagcaagtgctggaacaggaaaaacatctactatagttggacgaatagca
agtttaataaacaaaggtgttaaaccaaatcaaatactacttttaacttttacaaataaa
gcagcagcagagatggtagcaagagttgcaaaattttttggaaaagatatagcaaagcag
attatggcaggaacttttcattctgtttcatataaacttcttaaagaattgaatataaat
attactttaaaacagccaaatgaattaaaaacgctttttaaatctatatatgaaaaaaga
gttttttttgaaagagatgatgaagcttctccttatgatggtggatatttatatgatatg
tactctttgtatttaaattcaaatgatggagaagattttgcatcttggataaagtcaaaa
aatgcaaatcatgaaatttatactttaatttatgaagatgtagttgctgaatttaatgaa
ttaaaaaccaaatatggatatgtgaattttgatgatttattaactacaatgcttcaaatt
ctaaaagaaaaagagtttgactttaaagaaattttagtagatgagtatcaagatacaaat
ccacttcaaggaagattacttgatggatttagaccaaaatcacttttttgtgtaggtgat
tatgaccaaagtatttatgcttttaatggttctgatattggaattatttctacttttgta
aaaagatatgaaaatgcaaaagtttttactttaagaaaaaattatcgttcaactaaacca
attttagatttagcaacaaaagttattgaatataatgaaagagtttatgaaaaaaaatta
gaagttgtaagaaaagagacagaatataaacctaagttactagcttttaatgaacttttt
tcacaatatgaatatatttctgaacttatttcaaaaagtgaaactccacatagtgaaata
gctattatttatagaaataactctagtgctgatggaatagaagcaaatttaagagagttt
tcaattccagcacgtagaaaaggaggaatgagtttttttgattcagttgaagttaaattt
atacttgatattttagtaatgcaactatcacacaatgatatgatggcatttatccatata
gttgaacatggaaaaggaataggaaaagctatcgcaaaagatatttttgatgcacttata
aaattaggtgatggtgatttattaaaaggattttttcatccaagagatgatattaaaaat
ccatatgaaaatggaaaaataaaaaatcaacaattaggactttttgatgattttgttgaa
ttaggttctatttcaaaatttaaggattgtaatttcgaagaggcttttttaggaaatcca
atattaaaacatccaaaattaaatgttgatggtggaaaatatctttatgatatttatcta
cttttaaaacaattaagaaggtcaaaaaatccagaaacattaattggaggtattatttca
tctatggcttattcaaagttaaaagattttttatctacaaaacgagcaacacaaaaagat
ggaactataaatccaatgcaaaaaacaaaagccttagcaaaaataaatagaaaaggtatg
cttttaaaaaatctatcaagaaatttcaacgacctttcaaaatttataaactcaatgatt
ttaggtggaagtgagatgagtgaaggagaaggagtaaatctactttcaattcatgctagc
aaaggtttggagttcaaagaagtttatgtaatagatttaatggatggaagatttccgaat
cgaaaacttatgagtaaaggtggaagtattgaagaagaaagacgtcttttttatgttgca
gttacaagagcaaaggatatcttatatctatcttacgctaaatatgacaaaataaaaaag
atgacttttgttgcaagtccatttttgaaagaggctggaatgataataaaagattctgaa
gagtcttaa
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